Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02524 ATGGCATCTCCATTCAACACGCTTAAAGATCTTGACCTTGCTGCTGCTAATCAAGTTTGGCGTATCAAAATTCGTGTTATCAAGATATGGTCTATTATCATAGGTGAAGAAAAGTTTAGGAGGCCCAACTTGGAACTGGTTGTTATGGATGAATTAGGTCATCGGATACAGTGTTCTGTTAGGAATCCTCTAAGGAGATTCTTTGAACATGATTTAATTGAGGGTAAGGTGTACTCTATTGCCAATTTCTCACTTGAACCTAATAATCAGAAGTACAAGCCAACAACCCATGCTCTTCGTCTTTTCTTCAAGAGGGAAACTCAATGTCGTTCATTAGAGGATATTAACTTCCCTAACAATGTTTTTCACTTTGTCCCAAATGAAATGATACTTAATCATGATAATCACCACTCTCACTTGATAGATGTCATTGGATTATTAACCGGAAAGGGTGATATAATAGAGTTCACAAAGAATGGAAAGAAGTCTATATACATGGTGATTGAGCTTGATGATATGAAATCTAAGGGTAAAATAAGGTGTACTTTGTGGGAGGATTTTGCTAATAAACTGGTGAAACACATGGAGGAACAGCCTTCTACTGAATTTATAATCATCCTGCAATTTGCCAAGTTTAACATGTTCAAGGGAACTATGGGCATATCTAATACAAACTATAACTCTACCTTATACATTAATGCTGACCTTCAAGAGGTTAAGGAATTTAGACAGAGATTTATTATGGGAAATGACAAGGCTTCTAACCAGCTTTCTCAAATTGCATCTGATGTTTCAATGTCACTTGAGCAAGATCTTATTAGCCATACCCCATACAAGCCCATTTCTGAACTTAAGGAATCCACTGAGGGTGGAATATTTGTTACTATTGGAACAGTCATGTCCATTGATACTAGATTCGGTTGGTGGTATAAGGGGTGTAAGATGTGCTTTCATTCACTCAAAGAGGATGAGAATTCATACTATTGCCAATCATGTGATATTTATCCTAATATTCATATTCCTCGTTACTGTATTCACCTCAGAGTATCTGATGAAATGGATTCTGCCTCATTTATTATTTATGATAAGGAAGCCTCCAAGTTTCTTGAAATTTCTGCTTCTGAGCTTCGATTGAAACAGATAGCAAAGGGTTACAACAAGGATGAATTTCCCTTTGAGATAAACTCATTTAGAGGTAAGAAGTTCCTATTCAAGGTTTCTGTCAAGCTCGATGATATCAATGCTTTCCAGCCTTGCAAGATAACTGTTTTGAAGTTGACTGAAGATCCAACTATCCTGAATTTGTTTGCTGCCAAGTACAAGCTATCTGATCCGAACATCCCCATTGAAAACTCTGAGCTCCAGAGCTTACATACAGATTCTACTGATAATGCTAAGGAGATCAGTTCTCAGTCATGTGAAATTATTTCTCTTGACGTTAATGATGACTTTGTTACTCCCAAGAGAGGTATTATAGCTGGTGTAATGGCAAAAAAATTGGTTGATGTTTTTCCAGAGACTGTCACTACTTCCACTTCCAAATGTAGAAAGCTCTCTCATGATTCTGACTGCAGTTCTATCAAAAAGCATGCTGACTAA 1599 0.3696 MASPFNTLKDLDLAAANQVWRIKIRVIKIWSIIIGEEKFRRPNLELVVMDELGHRIQCSVRNPLRRFFEHDLIEGKVYSIANFSLEPNNQKYKPTTHALRLFFKRETQCRSLEDINFPNNVFHFVPNEMILNHDNHHSHLIDVIGLLTGKGDIIEFTKNGKKSIYMVIELDDMKSKGKIRCTLWEDFANKLVKHMEEQPSTEFIIILQFAKFNMFKGTMGISNTNYNSTLYINADLQEVKEFRQRFIMGNDKASNQLSQIASDVSMSLEQDLISHTPYKPISELKESTEGGIFVTIGTVMSIDTRFGWWYKGCKMCFHSLKEDENSYYCQSCDIYPNIHIPRYCIHLRVSDEMDSASFIIYDKEASKFLEISASELRLKQIAKGYNKDEFPFEINSFRGKKFLFKVSVKLDDINAFQPCKITVLKLTEDPTILNLFAAKYKLSDPNIPIENSELQSLHTDSTDNAKEISSQSCEIISLDVNDDFVTPKRGIIAGVMAKKLVDVFPETVTTSTSKCRKLSHDSDCSSIKKHAD 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02524 532 CDD RPA1_DBD_B_like 142 247 - -
Arst9g02524 532 Gene3D - 116 257 IPR012340 -
Arst9g02524 532 Pfam Replication factor-A C terminal domain 293 427 IPR013955 -
Arst9g02524 532 Pfam Domain of unknown function DUF223 45 133 IPR003871 -
Arst9g02524 532 Gene3D - 268 432 IPR012340 -
Arst9g02524 532 PANTHER OS03G0429900 PROTEIN 13 526 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst9g02524 532 CDD RPA1_DBD_C 281 445 IPR047192 -
Arst9g02524 532 Gene3D - 9 115 IPR012340 -
Arst9g02524 532 SUPERFAMILY Nucleic acid-binding proteins 135 246 IPR012340 -
Arst9g02524 532 CDD RPA1_DBD_A_like 21 107 - -
Arst9g02524 532 SUPERFAMILY Nucleic acid-binding proteins 276 429 IPR012340 -
Arst9g02524 532 SUPERFAMILY Nucleic acid-binding proteins 5 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02524 Arst-Chr9 92645472 92648038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02524 20 423 Core DNA Replication Machinery Family AT5G08020 25.592 2.84e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02524 - - aip:107636694 899.427