Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02506 ATGGGGCAAGGGCAGTCCAAGAGCGAATTGCTCTATCAGCAGGTCAGTTATGGGAACATAGAAGGAATCAAAGCCCTTCACAGAGATGGTGCAGGCCTCGAGTGGATAGACAGAGAAGGAAAAACCCCCTTGATTGTTGCATGCATGAATCCTGAGCTTTATAATGTTGCCAAAACTTTGATAGAACTTGGAGCCAATGTCAATGCATACCGTCCAGGTCGTCATGCGGGGACTCCATTGCATCATGCTGCTAAACGGGGGCTTGAAAGTATTGTTAAGTTACTTCTTTTGCATGGAGCAAATCCTTTGATCTTGAATGATGATTGTCAAACTGCTCTTGAGGTCGCCAGGGCCAAAGGACACAGCAATGTTGTTAGGGCAATTGAGAGTCATCTATGCTTGTTCTGTGGTTGGATGCGAGAATTTCATGGACCTGGCTTTCTAGAAGTAGTAGCTCCTCAGTTGGTATCTAGAAGAGTTTGGGTGGTTGTTTTACCAGTTGGCTCCCGCAATCCTACCAGACCTTACAAGTTGGAGCTTGCTTTATATTCTACTTTGCAGGATGGACAACCACGAACACTAATTCCTCTGTGGAGGGCCAATTTAGAAGAACCAAAGCTTCACCAGTCTGACCCATCCGTGACAATTGCTGATATGACTTCCCGAACACGGGTTAAACTTGCACCTGCAAAAGAGAATGACAGGCACCAACTTGCATTGTTTTCTAATGCTTGCAAAGGGATTCCACAGGCAAGTCCAGCATTTTTGCAAAGTAATGTGCCTCCGGCCACAGCACCACCATCTACAGAAGGCGAAGGCGAAGACGCAGAGCTGGCTATGGCCATCAGTGCATCTCTTCAGCAGGCCATTCAGGAGAGACCACCTTTTCCAGCTGCCCAACCAAACTTCGAAGCAAGCTCTTCAAGCAGCGGTGCAAACAGAAGCAAACTTGGTTTTCTAGGCACCCAAAATCCAAACACAAGTGAAAGCGAGCCTGTACAGGAAGTCCATGAAAATGCCTCTGCTGGACATGCTGCCAGCAGTCTTGATTTCGATCCATCAGCTCCACCAGCCCCTCCAGCTGCCGATGATGATATTCCGGTGGACGGCCCCATTCAATACCCTTCAATTGACATAAGCCCTGTGGACATGTCATCGCCAGTTGTTGAGAACCTACCGAAAGATGAAGAAGGAAAACATGCCGGAGGAAGCGGCTCATCATGTGTGATATGTCTGGATGCACCGGCAGAGGGGGCATGCATACCATGTGGTCACGTGGCCGGATGCATGTCGTGCTTGAATGAGGTCAAGACAAAGAAATGGGGTTGCCCGGTGTGTCGAGCGAAAATAGACCAGGTCATAAAGCTGTACCATGTTTGA 1380 0.4841 MGQGQSKSELLYQQVSYGNIEGIKALHRDGAGLEWIDREGKTPLIVACMNPELYNVAKTLIELGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLLHGANPLILNDDCQTALEVARAKGHSNVVRAIESHLCLFCGWMREFHGPGFLEVVAPQLVSRRVWVVVLPVGSRNPTRPYKLELALYSTLQDGQPRTLIPLWRANLEEPKLHQSDPSVTIADMTSRTRVKLAPAKENDRHQLALFSNACKGIPQASPAFLQSNVPPATAPPSTEGEGEDAELAMAISASLQQAIQERPPFPAAQPNFEASSSSSGANRSKLGFLGTQNPNTSESEPVQEVHENASAGHAASSLDFDPSAPPAPPAADDDIPVDGPIQYPSIDISPVDMSSPVVENLPKDEEGKHAGGSGSSCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYHV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02506 459 ProSiteProfiles Ankyrin repeat region circular profile. 39 69 - -
Arst9g02506 459 ProSiteProfiles Zinc finger RING-type profile. 408 447 IPR001841 -
Arst9g02506 459 SMART ANK_2a 39 69 IPR002110 GO:0005515
Arst9g02506 459 SMART ANK_2a 75 104 IPR002110 GO:0005515
Arst9g02506 459 Pfam Zinc finger, C3HC4 type (RING finger) 406 453 - -
Arst9g02506 459 SUPERFAMILY Ankyrin repeat 9 133 IPR036770 -
Arst9g02506 459 MobiDBLite consensus disorder prediction 253 274 - -
Arst9g02506 459 Gene3D - 79 132 IPR036770 -
Arst9g02506 459 MobiDBLite consensus disorder prediction 301 335 - -
Arst9g02506 459 Pfam Ankyrin repeats (many copies) 60 116 IPR002110 GO:0005515
Arst9g02506 459 SUPERFAMILY RING/U-box 407 453 - -
Arst9g02506 459 CDD RING-HC_XBAT35-like 404 457 - -
Arst9g02506 459 ProSiteProfiles Ankyrin repeat region circular profile. 75 101 - -
Arst9g02506 459 ProSiteProfiles Ankyrin repeat profile. 39 72 IPR002110 GO:0005515
Arst9g02506 459 SMART ring_2 408 446 IPR001841 -
Arst9g02506 459 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Arst9g02506 459 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 388 458 IPR013083 -
Arst9g02506 459 Gene3D - 3 78 IPR036770 -
Arst9g02506 459 PANTHER ROLLING PEBBLES, ISOFORM B 402 457 - -
Arst9g02506 459 MobiDBLite consensus disorder prediction 296 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02506 Arst-Chr9 91868391 91873563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02506 398 456 C3H Transcription Factor Family AT3G06140 33.898 1.41e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02506 - - gmx:100805974 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g02506 9 91868391 91873563 Arst9g02506 9 91868391 91873563 ECH