Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02494 ATGGTTGATTTGATGTTTGAGAGAAGGGGTGGAGTGGTTGATGTTATCATCCCTGGATATGAGGAAGATTTCAAATGTAAGATCATTCCTCCACGTGAGGCCTGGAGGATCAAAGTCAGGGTACTAAGGGCTTGGACTGTACCTAGCTTTGGTAATGCAGATGTTCCAAATTCAATGGAACTTATTCTGGTTGATGAAAATTCTACCAAAATCCAGGCCACTATAAGGAAGCAACTAATACACAAATTTAAAGATCATCTTCTTGAAGGCAGTTGTTATAAGATGAGTTATTTTGCTGTTGTTTCAAACCAAGGCTCTTATAGAGCTACAAAGCATGAGTTCAAACTCATTTTTCTATTTCGTACAACAGTGACAACAATTCCTGATGATATAATACCCAAGTCTTGTTTTTCTATATATCCCTTTGAAGACATATTGCAAATGAGTCAGGATCATGACTATTTAGTCGATGTAATTGGTCTTTTGACATTGGTTGGGGAAGAGAAAAACTATGACAGGGATGGTAAAACGGTTAAGATGGTTGTTGTCGAACTTTCTTCACAAAAGATGATGCTGCGATGCGCATTATTTGGAGAGTACGTGGACCAGTTAAATGATTTTCTTGCTTCTGGTTATGTTGAGCAACCGGTTGTCATTGTTCAACTTGCTAAGATTAAACTTTTTCGAGGTCAACCTGGTCTCCAGAATGTTATGAAAGCAACAAAAATTTACTTTAATCCTGATTTGTCAGAAGTTATTGATTTTCGAAAAAGCATGGTCGAACAAGGAATTAATGGCACTCAACCTTTATTCATTGCGAATGAGGGAAAATCCGTTTCATTGGAGGATGACTTCATGCGCCTAACTAGGCGATCCACAACAGATCAATTACATGATAACAAAGAGGATGGGAGTTTTGTTATTATGGGTACTATCACTGATATTGTTGAAGAGGGCTGTTGGTGGTATTCCACTTGTGTGTGTGGAAAGGCAGTTTATCCTGAGTCTGGGGTCTATTTCTGTGATGTTTGCATGCATCATGTGACAAATGTGATTCCAAGGTTCAGACTTAAAGTAGCAGTTTCTGATCATACTGGACAAGGCATATTCGTTTTGTTTGATCGTGAAACAGCTTATTTGCTTAAAAAAGCATGTGCTGACCTTTTTAATGAAGTCCAAAAGGAGTCAACTGTTCTGTGTGGAGATAGCTATTCTATTACATTTAAAACTTTAGAGGGTAAAAAAGTTTTACTAAAAGTAGATACCAAGTCCCTTGGTATAGACAAATACTTTGGAACCTTTCGTGTAAAAAGGATATGTGATGACCCAACTATTATTTCTATGTTTGAGCTTGCTGAGAATGAGAACGAAGTGACACCTGTCAAGGATGCACATGTTCCTGGGATTGGTTTGGACATAGGTGAACCCTCTTATACACAGCCTACTTCAAAAGATGTTAAGCTTTCAGTCTTGGATAAGGATGAAAGTGTTCCTGGTCTTGATGACATTTCGATAGATATGGACGCTAATAGGAAATCTGTTGTTCCTCAAGTTTCTGGCGATAATGATGAGAATCAGGTCTTTAGTGATGAAGTTGGCTCATTGCTCAACTCAGGTGTTGAAGAAACTCAGGACTTCCTATCTCATCTTCTGGATAATTCGGACAACACTGATGTTTCTTTTATTTGCAATGATGTTGTGCGTTCCAAAGTAAAGAGAAACCTTGAATCAGATTTTCAGAAAGCCTTGGAGGAAACTGTTGGTCCTTCATCAAAGATGATCAAGATTGAAGATAATTTGGATGGATAG 1809 0.3803 MVDLMFERRGGVVDVIIPGYEEDFKCKIIPPREAWRIKVRVLRAWTVPSFGNADVPNSMELILVDENSTKIQATIRKQLIHKFKDHLLEGSCYKMSYFAVVSNQGSYRATKHEFKLIFLFRTTVTTIPDDIIPKSCFSIYPFEDILQMSQDHDYLVDVIGLLTLVGEEKNYDRDGKTVKMVVVELSSQKMMLRCALFGEYVDQLNDFLASGYVEQPVVIVQLAKIKLFRGQPGLQNVMKATKIYFNPDLSEVIDFRKSMVEQGINGTQPLFIANEGKSVSLEDDFMRLTRRSTTDQLHDNKEDGSFVIMGTITDIVEEGCWWYSTCVCGKAVYPESGVYFCDVCMHHVTNVIPRFRLKVAVSDHTGQGIFVLFDRETAYLLKKACADLFNEVQKESTVLCGDSYSITFKTLEGKKVLLKVDTKSLGIDKYFGTFRVKRICDDPTIISMFELAENENEVTPVKDAHVPGIGLDIGEPSYTQPTSKDVKLSVLDKDESVPGLDDISIDMDANRKSVVPQVSGDNDENQVFSDEVGSLLNSGVEETQDFLSHLLDNSDNTDVSFICNDVVRSKVKRNLESDFQKALEETVGPSSKMIKIEDNLDG 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02494 602 Gene3D - 277 444 IPR012340 -
Arst9g02494 602 Gene3D - 26 129 IPR012340 -
Arst9g02494 602 SUPERFAMILY Nucleic acid-binding proteins 28 130 IPR012340 -
Arst9g02494 602 CDD RPA1_DBD_B_like 157 259 - -
Arst9g02494 602 CDD RPA1_DBD_C 293 437 IPR047192 -
Arst9g02494 602 Pfam Domain of unknown function DUF223 60 155 IPR003871 -
Arst9g02494 602 CDD RPA1_DBD_A_like 36 124 - -
Arst9g02494 602 Gene3D - 131 267 IPR012340 -
Arst9g02494 602 SUPERFAMILY Nucleic acid-binding proteins 295 441 IPR012340 -
Arst9g02494 602 Pfam Replication factor-A C terminal domain 307 421 IPR013955 -
Arst9g02494 602 SUPERFAMILY Nucleic acid-binding proteins 137 259 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02494 Arst-Chr9 91477646 91481455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02494 30 366 Core DNA Replication Machinery Family AT2G06510 22.535 8.56e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02494 - - ahf:112711209 1198.73