Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g02470 | ATGACGGGGCAAGCGGTGAAGCTGAATAGAGCCAAGCTTGAGGCATGCTTAACATGTCCTTTGTGCAATAAATTGTTCAACAATGCCACCACCATTTCAGAATGCTTACACACTTTTTGCAGGGGATGCATAGATAAGAAGCTAATAGATGAGCAACTAAAGCACTGTCCAGTATGCAATGCTGACTTGGGTTGTTCTCCACTTGATAAATTAAGGACAGATCATAGTTTACAAGATTTGAGGAACAAAATTTTGCCTGAAGAAGGAAAAAAAATTGCCAAGACACCTAAGAATTGTGTGAAAAGAAAGAAGAAATCTCTGTCTTCTCTAGAAGCCAACGCAACAGAAGCAAAAGCTGCTACTCCTGAGAGAGAAGTTTCCGCGCCTTCGCAACCGGATTGTTCTTCTCCTAAGCCTGAAAAGGTGGAGGAAGATGTCAGGAAAGACGAGAAACAACCGCGGAGGATAGGAATCTTGGATGAAGTCTCTACAAAGTTAACTGCAAGAAGAGCTAAAGTTGTAGCAAGAAAAAAGTACCTTCTGAAAGAGTTAACATCATCTTGTGAACCGGATAAAGTAACGGGAGATCAGAAGAAAGAAAATGATGACCGGTTTCAGCTTGAAATTTCCAATGACAGTTCCAAAGCCAGAGTTCAGAATCCTTCAAAACCAGATTCAAGTCAACAAATAGTGCCAAACAAGATTCCAATTGACAATGTTGAATCATGGCAAGAAGCTCTTGATTTGTGTGAGCCATTAAATTCCATTGTAGAAGCTGCAAGGAAGAACAAATCTTGCAGTAAGTCCACTATGCAAGAACATGCTGTCATTCCATCAGTAAAGTCAAGTGACAATGATGGCCAGCCTAAGGTTGAAAATGGTGATGAGAATGAATCGAATCGTTCGAGATCATCGGATACAAAAGGAAGAAAACTCAAATTCTCTGAGGACTTGAATGTTCCAGTACAGCAGCCTGTGATTACTTCAAATGGTGAAAGCAACAGAGGGTTTGGTCCAGTTTGGTTCTCCTTGGTTGCTTCTGAAGTGAACGAAGAAAGTGCAAAATTGCCAAAAATAACCCCCAGCTACTTAAGGGTCAAGGATGGTAGTTTACTTGTTTCCCATATCAAAATGTATATAGTGAAGAAGCTTGGTCTTGTTAGCGAATCCGAGGTGGAGATCTCTTTGCAAGGTAAACCGGTTCTACCTTGCATGCAACTGCAAAACTTGGTAGAGTTGTGGCTGCAAACAAAGCCATTGAATGAGAAGATTCAAACACATGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCATATCATCGAAAGTCCTGA | 1338 | 0.4088 | MTGQAVKLNRAKLEACLTCPLCNKLFNNATTISECLHTFCRGCIDKKLIDEQLKHCPVCNADLGCSPLDKLRTDHSLQDLRNKILPEEGKKIAKTPKNCVKRKKKSLSSLEANATEAKAATPEREVSAPSQPDCSSPKPEKVEEDVRKDEKQPRRIGILDEVSTKLTARRAKVVARKKYLLKELTSSCEPDKVTGDQKKENDDRFQLEISNDSSKARVQNPSKPDSSQQIVPNKIPIDNVESWQEALDLCEPLNSIVEAARKNKSCSKSTMQEHAVIPSVKSSDNDGQPKVENGDENESNRSRSSDTKGRKLKFSEDLNVPVQQPVITSNGESNRGFGPVWFSLVASEVNEESAKLPKITPSYLRVKDGSLLVSHIKMYIVKKLGLVSESEVEISLQGKPVLPCMQLQNLVELWLQTKPLNEKIQTHVGSSAKDFVMVLSYHRKS | 445 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g02470 | 445 | SMART | ring_2 | 19 | 59 | IPR001841 | - | |
Arst9g02470 | 445 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 110 | IPR013083 | - | |
Arst9g02470 | 445 | ProSiteProfiles | Zinc finger RING-type profile. | 19 | 60 | IPR001841 | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 265 | 315 | - | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 211 | 233 | - | - | |
Arst9g02470 | 445 | Coils | Coil | 100 | 120 | - | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 192 | 210 | - | - | |
Arst9g02470 | 445 | Pfam | Zinc finger, C3HC4 type (RING finger) | 19 | 59 | - | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 189 | 233 | - | - | |
Arst9g02470 | 445 | SUPERFAMILY | RING/U-box | 13 | 86 | - | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 265 | 287 | - | - | |
Arst9g02470 | 445 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE DRIP1 | 1 | 444 | IPR044807 | GO:0004842 | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 110 | 152 | - | - | |
Arst9g02470 | 445 | CDD | RING-HC_PCGF | 17 | 60 | - | - | |
Arst9g02470 | 445 | ProSitePatterns | Zinc finger RING-type signature. | 35 | 44 | IPR017907 | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 137 | 152 | - | - | |
Arst9g02470 | 445 | MobiDBLite | consensus disorder prediction | 288 | 315 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g02470 | Arst-Chr9 | 89685479 | 89689319 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst9g02470 | 1 | 367 | C3H Transcription Factor Family | AT2G30580 | 31.443 | 1.54e-37 | 138 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g02470 | K16277 | - | pop:7474161 | 309.301 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst9g02470 | 9 | 89685479 | 89689319 | Arst9g02470 | 9 | 89685479 | 89689319 | ECH |