Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g02462 | ATGGCAACTATGTTGGCAAAGGAGCATGGCTTGAATCTGAAAGAGACTGAGCTTTGCCTTGGCCTGCCCGGTGGAGGTGGAGGCGGAGGCGGAGACACGGCAACGGCAGAAACTCCGAGAGCCACCGGGAAGAGAGGGTTCTCTGAGACGGTTGATCTGAAGCTTAACCTTCAAGGCAATGATACTAACAAGGAAGATCTGAATGAGAATCTGAAGAATGTTCCAAAGGAGAAGACTCTCCTTAAGGACCCTGCCAAGCCACCCGCTAAGGCTCAAGTAGTTGGATGGCCACCAGTGAGGTCATACAGAAAGAACATGATGGCACAAAAAGTGAGCACTGAGGAAAATAACAATGGCAGCGCCACCACTGAGAAGACAACAAGCAGCGCCGCCGCTGCAGCTACCACCGCTGCTTCTACTGGTGGTTCATTTGTGAAGGTCTCCATGGATGGAGCTCCTTACCTTCGCAAGGTCGACCTGACAATGTACAAAAGCTACCAAGACTTATCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGTAACTATGGGTCCCAAGGAATGATTGATTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGGATCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAAGCTATTGGGCTTGCGCCAAGGGCCATGGAGAAATGCAAAAGCAGAAGCTGA | 783 | 0.4968 | MATMLAKEHGLNLKETELCLGLPGGGGGGGGDTATAETPRATGKRGFSETVDLKLNLQGNDTNKEDLNENLKNVPKEKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVSTEENNNGSATTEKTTSSAAAAATTAASTGGSFVKVSMDGAPYLRKVDLTMYKSYQDLSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKSRS | 260 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g02462 | 260 | Pfam | AUX/IAA family | 16 | 251 | IPR033389 | - | |
Arst9g02462 | 260 | ProSiteProfiles | PB1 domain profile. | 142 | 242 | IPR000270 | GO:0005515 | |
Arst9g02462 | 260 | SUPERFAMILY | CAD & PB1 domains | 139 | 241 | - | - | |
Arst9g02462 | 260 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 11 | 247 | IPR003311 | GO:0005634|GO:0006355 | |
Arst9g02462 | 260 | MobiDBLite | consensus disorder prediction | 22 | 48 | - | - | |
Arst9g02462 | 260 | FunFam | Auxin-responsive protein | 137 | 252 | - | - | |
Arst9g02462 | 260 | Gene3D | - | 137 | 254 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g02462 | Arst-Chr9 | 89453474 | 89456218 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst9g02462 | 119 | 245 | B3 DNA Binding Superfamily | AT3G61830 | 29.921 | 1.18e-09 | 56.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX or IAA | Arst9g02462 | AUX_IAA | 6.3e-84 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g02462 | K14484 | - | gmx:100810762 | 383.645 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst9g02462 | 9 | 89453474 | 89456218 | Arst9g02462 | 9 | 89453474 | 89456218 | ECH |