Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02461 ATGGCAACATCAGCATCCGCATATGAGAATGATATCAAGAACCTTAAGGCAACAGAACTCACATTGGGTTTGCCAGGGACTCATCTTCAACAGAATGTTCCTATTATTGATCAAGAAAAATCATCAGCATCATCTTCATCAAACAAGAGGCCATTGCAATTGCCTCATGAAGAAACTTCTCCTGCTCAGGACTGTGGATCTAAGTGCTCTAATATTGCTAAGAACACTGATGATGATGCTGCACCCCCTCCTTCCAAGGCAAAGATAGTGGGGTGGCCACCAATTAGATCATACAGGAAGAACAGCCTTCAGGAACAATCTGAGGCTGCAGGTGGGATCTATGTGAAGGTGAGCATGGATGGAGCACCTTACCTCAGAAAGATTGATTTGAAGATCTATGGAGGCTATCCACAACTCCTCAAAGCCCTTGAAAACATGTTCAAGTTGACTATAGGTGAGTACTCTGAAAAGGAAGGGTATAAGGGATCTGATTATGCACCAACATATGAAGACAAGGATGGTGACTGGATGCTAGTTGGAGATGTTCCTTGGGACATGTTTGTGACTTCGTGTAAGAGGCTAAGAATCATGAAAGGATCTGAAGCCAGAGGTTTGGGTTGTGCTGTATGA 630 0.4365 MATSASAYENDIKNLKATELTLGLPGTHLQQNVPIIDQEKSSASSSSNKRPLQLPHEETSPAQDCGSKCSNIAKNTDDDAAPPPSKAKIVGWPPIRSYRKNSLQEQSEAAGGIYVKVSMDGAPYLRKIDLKIYGGYPQLLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCAV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02461 209 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 14 203 IPR003311 GO:0005634|GO:0006355
Arst9g02461 209 Gene3D - 107 209 - -
Arst9g02461 209 SUPERFAMILY CAD & PB1 domains 108 198 - -
Arst9g02461 209 Pfam AUX/IAA family 18 206 IPR033389 -
Arst9g02461 209 ProSiteProfiles PB1 domain profile. 112 199 IPR000270 GO:0005515
Arst9g02461 209 FunFam Auxin-responsive protein 107 209 - -
Arst9g02461 209 MobiDBLite consensus disorder prediction 24 54 - -
Arst9g02461 209 MobiDBLite consensus disorder prediction 23 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02461 Arst-Chr9 88738364 88739828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02461 101 205 B3 DNA Binding Superfamily AT2G46530 35.849 8.02e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Arst9g02461 AUX_IAA 1e-56 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02461 K14484 - gmx:100527777 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g02461 9 88738364 88739828 Arst9g02461 9 88738364 88739828 ECH