Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02342 ATGAGGTTCGCTCGTATGGCTCGAAATTTGTTTCCTGGTCTTGAGGGTATTGAGCAGATGATAAAAATATTTGGTATATACCTCGCTGCTAAGATTAAAATAAATGGTGAAATTGATTGGTACACTATGCTTGGTGTAGGCACGCAAGACGATGTTGCCACGATGAGGGAATCGTATGTGAGTTTAGCTTCCCTGATTCACTCTGAGAGGAACAAGTTTGTTGGCGCAGATGGGGCCTTTGAACTTGTTTCGCAAGCATGGAGTGTGCTGTCAGATAAGGCTAAGAGGGCAATGATCGATGAGAAGATTAATGCCCCAGCATTCGATGAGGAGGTGAAGGTGGAAACATGTAAACTTGCAACTGAGTGTGAATATATACCATCAGAAGAGGGGGCTAATTGTGATCACAATGTTACCGAGGCTGCCACTTCAATTGCAAAGATTCAGAAGGAGAATTCACCTGCATCAAGATCAAGTACATTTTGGACTATGTGCCGTAGGTGCAAGCTTGTATTCCTGTACCCTAGAATTAAAGTTAACTGTAGACTTTTGTGTTTTGTTTGCAACAAAGAATTTATGGCAGTTGAACTAGATAGACGGAAGGTTTTATCAGCAAGGAGGCGCTCCAGGGGGTTGCACACTGTCAATCCACAGGCACATGATGTAAGCAACTTTCATGGCAGTACATTACTGAGAAAAACTTGTCAGGGTTCCTCTGCAACTCAAGAAAAAGATGTTCAACAGATGTATCAGAAAGTAAAGCGAAAGCGCAATGAGGAGCAAGTAACAGAGAGGGAAAATGCCTCCCAAGAGGAGCACCCTGTTGCTAAAAGAAGTTACTTTAATCCTTCCAAGATAAGAAGTGCCTTGGAGGATATGAGCTTGACCAGCTGTGATGAGCGAAACTCAAAGGAGCCGGATTTCAAATATAGCGGGATAACCCAAGCTAAAGAGAGCGGCATTGCAAAAGGCATCTACCAGGCGGAGCTTCGTAACCATTTTATGGACATTGCTGTAAATGCGCTTAGTACAAAACTAGCTGCCCTTAATCCGGATACTAATGATAGCCAGAAAGCAAATGAGACGGGCGAAACATTTTTGAGGGAATCTGAAAGTTGTGATCAAGACAATTGTGAGAAGCCAGACGAAAGGACAAGTGGAGTCCAAGCAACCATGCCATCTGCAGGCTCTAATACTATGACTGACATGCTAACAAAATCTTTGGGGAAGATGTCAATAGATTTCCAATTTCCAAATAATGCAGATAAAGAAGTATAG 1278 0.4272 MRFARMARNLFPGLEGIEQMIKIFGIYLAAKIKINGEIDWYTMLGVGTQDDVATMRESYVSLASLIHSERNKFVGADGAFELVSQAWSVLSDKAKRAMIDEKINAPAFDEEVKVETCKLATECEYIPSEEGANCDHNVTEAATSIAKIQKENSPASRSSTFWTMCRRCKLVFLYPRIKVNCRLLCFVCNKEFMAVELDRRKVLSARRRSRGLHTVNPQAHDVSNFHGSTLLRKTCQGSSATQEKDVQQMYQKVKRKRNEEQVTERENASQEEHPVAKRSYFNPSKIRSALEDMSLTSCDERNSKEPDFKYSGITQAKESGIAKGIYQAELRNHFMDIAVNALSTKLAALNPDTNDSQKANETGETFLRESESCDQDNCEKPDERTSGVQATMPSAGSNTMTDMLTKSLGKMSIDFQFPNNADKEV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02342 425 SMART dnaj_3 38 95 IPR001623 -
Arst9g02342 425 MobiDBLite consensus disorder prediction 254 273 - -
Arst9g02342 425 Coils Coil 246 266 - -
Arst9g02342 425 SUPERFAMILY Chaperone J-domain 28 100 IPR036869 -
Arst9g02342 425 ProSitePatterns Nt-dnaJ domain signature. 80 99 IPR018253 -
Arst9g02342 425 MobiDBLite consensus disorder prediction 364 383 - -
Arst9g02342 425 Pfam DnaJ domain 39 100 IPR001623 -
Arst9g02342 425 MobiDBLite consensus disorder prediction 254 276 - -
Arst9g02342 425 CDD DnaJ 39 92 IPR001623 -
Arst9g02342 425 MobiDBLite consensus disorder prediction 364 402 - -
Arst9g02342 425 PANTHER BNAC03G44070D PROTEIN 2 314 - -
Arst9g02342 425 MobiDBLite consensus disorder prediction 387 402 - -
Arst9g02342 425 Gene3D DnaJ domain 35 114 IPR036869 -
Arst9g02342 425 ProSiteProfiles dnaJ domain profile. 39 103 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02342 Arst-Chr9 84197484 84199509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02342 3 203 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 25.604 1.23e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02342 - - aip:107619213 779.63