Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02340 ATGGATGAGTCAAATAAGCATAAGGCCATCAGAGCCAAAGAGATTTCTGAGAAAATGTTTGCTGCAGATGATGTTTATACTGCAATGAGGTTCGCTCGTATGGCTCGAAATTTGTTTCCTGGTCTTGAGGGTATTGAGCAGATGATAAAAATATTTGGTATATACCTCGCTGCTAAGATTAAAATAAATGGTGAAATTGATTGGTACACTATGCTTGGTGTAGGCACGCAAGACGATGTTGCCACGATGAGGGAATCGTATGTGAGTTTAGCTTCCCTGATTCACTCTGAGAGGAACAAGTTTGTTGGCGCAGATGGGGCCTTTGAACTTGTTTCGCAAGCATGGAGTGTGCTGTCAGATAAGGCTAAGAGGGCAATGATCGATGAGAAGATTAATGCCCCAGCATTCGATGAGGAGGTGAAGGTGGAAACATGTAAACTTGCAACTGAGTGTGAATATATACCATCAGAAGAGGGGGCTAATTGTGATCACAATGTTACCGAGGCTGCCACTTCAATTGCAAAGATTCAGAAGGAGAATTCACCTGCATCAAGATCAAGTACATTTTGGACTATGTGCCGTAGGTGCAAGCTTGTATTCCTGTACCCTAGAATTAAAGTTAACTGTAGACTTTTGTGTTTTGTTTGCAACAAAGAATTTATGGCAGTTGAACTAGATAGACGGAAGGTTTTATCAGCAAGGAGGCGCTCCAGGGGGTTGCACACTGTCAATCCACAGGCACATGATGTAAGCAACTTTCATGGCAGTACATTACTGAGAAAAACTTGTCAGGGTTCCTCTGCAACTCAAGAAAAAGATGTTCAACAGATGTATCAGAAAGTAAAGCGAAAGCGCAATGAGGAGCAAGTAACAGAGAGGGAAAATGCCTCCCAAGAGGAGCACCCTGTTGCTAAAAGAAGTTACTTTAATCCTTCCAAGATAAGAAGTGCCTTGGAGGATATGAGCTTGACCAGCTGTGATGAGCGAAACTCAAAGGAGCCGGATTTCAAATATAGCGGGATAACCCAAGCTAAAGAGAGCGGCATTGCAAAAGGCATCTACCAGGCGGAGCTTCGTAACCATTTTATGGACATTGCTGTAAATGCGCTTAGTACAAAACTAGCTGCCCTTAATCCGGATACTAATGATAGCCAGAAAGCAAATGAGACGGGCGAAACATTTTTGAGGGAATCTGAAAGTTGTGATCAAGACAATTGTGAGAAGCCAGACGAAAGGACAAGTGGAGTCCAAGCAACCATGCCATCTGCAGGCTCTAATACTATGACTGACATGCTAACAAAATCTTTGGGGAAGATGTCAATAGATTTCCAATTTCCAAATAATGCAGATAAAGAAGTATAG 1362 0.4244 MDESNKHKAIRAKEISEKMFAADDVYTAMRFARMARNLFPGLEGIEQMIKIFGIYLAAKIKINGEIDWYTMLGVGTQDDVATMRESYVSLASLIHSERNKFVGADGAFELVSQAWSVLSDKAKRAMIDEKINAPAFDEEVKVETCKLATECEYIPSEEGANCDHNVTEAATSIAKIQKENSPASRSSTFWTMCRRCKLVFLYPRIKVNCRLLCFVCNKEFMAVELDRRKVLSARRRSRGLHTVNPQAHDVSNFHGSTLLRKTCQGSSATQEKDVQQMYQKVKRKRNEEQVTERENASQEEHPVAKRSYFNPSKIRSALEDMSLTSCDERNSKEPDFKYSGITQAKESGIAKGIYQAELRNHFMDIAVNALSTKLAALNPDTNDSQKANETGETFLRESESCDQDNCEKPDERTSGVQATMPSAGSNTMTDMLTKSLGKMSIDFQFPNNADKEV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02340 453 Coils Coil 274 294 - -
Arst9g02340 453 SUPERFAMILY Chaperone J-domain 56 128 IPR036869 -
Arst9g02340 453 MobiDBLite consensus disorder prediction 282 301 - -
Arst9g02340 453 MobiDBLite consensus disorder prediction 392 411 - -
Arst9g02340 453 MobiDBLite consensus disorder prediction 282 304 - -
Arst9g02340 453 Pfam DnaJ domain 67 128 IPR001623 -
Arst9g02340 453 MobiDBLite consensus disorder prediction 415 430 - -
Arst9g02340 453 CDD DnaJ 67 120 IPR001623 -
Arst9g02340 453 PANTHER BNAC03G44070D PROTEIN 1 341 - -
Arst9g02340 453 MobiDBLite consensus disorder prediction 392 430 - -
Arst9g02340 453 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Arst9g02340 453 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Arst9g02340 453 Gene3D DnaJ domain 63 142 IPR036869 -
Arst9g02340 453 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02340 Arst-Chr9 84197484 84199526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02340 2 231 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 25.424 7.96e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02340 - - ahf:112711122 818.535