Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02331 ATGGTCGTTAGTGGAGGGAAGCCTCTGAAGCGCATGAAGAGGAGAGTCACGGCTGATTTCTACGACTTTCTCTCGTTCCCCTCCCCATCACTCGCCGCCCACGAGGGCTTCGCCGGCGCTCCCTTCAGATCTGCCGTCCGATCCTTCCTTACGAAGCACGCGCTTCTCCCGCCGCCTTCCGCGCTCTTCCCTCACCTGCTGACATGGCAGATCCTCTTCCGTGTTGGCGACGTCGCAGGCGAAGGGGGTGCGGAGTCCGGCGGTGCGGCGGCGGTGTGCCTCGACATCGTGGAGGAGGACGTTGCCAGATCCAGATCTGTGTACTGCGACCAGTGCCGAGTTTTCGGTTGGAGCGGCCATCCAGTGTGCGGGAAACGTTACCATTTTATAATCAAAGCTGATGGAAGCTCCATTGGTGGGTACCATAAACCATGTATGTGCTGTGGAGATATCCTGCACTTGTCAGAATCCAAGTGTAAGTCGTGCAACCATGCGACTACCACTGATGATGTGGAGGACTGGGTGTACCACCAGTTAGAGAATACGACACATCTCTTACATGGTGTAGTCCATGCCAATGGTTATGGGCACCTTCTACGGGTTAATGGCAGAGAAGGTGGATCTAGATATCTTTCTGGTTGCCATATCATGGACTTTTGGGATCGCCTATGCAAGACACTTGGAGTCAGAAAAGTTAGCGTGATGGATGTTTCAAAGAAATATGGGTTAGAGTACCGCCTACTCCATACAATCATGAAGGGACATCCCTGGTATGGTGACTGGGGTTATCAATTCGGTTCTGGTAGCTATTGTCTCACGCATGAAGCATACAAGACTGCGGTTGACAGCCTATCCAATTTGCCCTTGTCTACCTACCTGTGCCAAGGACAAAATTCTTCCCTCCCTCGTGTTCAGGGCATGATTTCATACTTTCAATCTTTGTCAGACCATGAGCTTGTAAATGTAAGGGACCTCTTTTGTTTTTTGATGGGTTTGATTCATGATGCTCGCAACACTGCAACAAAGGTTGATGACGTGGCCTGCAAGAAGCGCCGTGTTAACGATTCTGGACTGTTATGGTATTGGGAGAAGAAGGATATTGAACGTGTGGAGGAAGCCATGCTGAAGGTGTTGCGTGCAGTGTCTGGGTCCAATTGGGTGAGCTCTCGAGCTCTTAGGGGTGCAGTCTGCAAGTTGGCCTCTACAGAGCTTCTTGATTATTGCCTTGGAGGACTGGGAGGAAAAGTGGTCTATGGTGGAATGGTTGTTAATGCCCGATGCAACCCTCAAACTGGAACGTTTGAATACAGACTTGAGGCTGCAAATGGCTCCTCCTTTGGAATTATTGCAAACAACTCTTCTGGTTCAAAGTATCCATCCAAAGAGAATCTCCTACAGTGTTTGAGATATTTATATGAGGCTTTGCTTCACCCTCAGATGATGGTAAATTATGCCCCCGAAGGGACAAGGGTTCTTGCAATGAGTTCAGCTCAGAAGCTTCTTGATTGCAAGCAGTTTGTGAAAGACTACACTCCTGGGATGCCCCCAATGTCAGACCTGCAGAAAATACGAATATCATGTCAGGTTGAACTGGTGGATGAAGCTGAAGATCCTGCAGCCAAAACTCCACCGGAACTGATTGTGCTGCCTGCAGATGCCACTGTCTCTGATGTTAAGATCGAAGCAGCAAATGCTTTCCAAGATGTATATCTGATGTTCAGAAGATTTCAAGTTGATGAGCTACTTGGCTATAGCGGTGTTGAAGATCCCACCCAGGTCAAGCACTTATTAGGATCAGAAGAACCCGCCACGGTTTGTGTCCGTGGAAGATGCATGGCGAAGAATGGACTGAGCAAGTTCCGAATGGAACGAGGACTCGAGAGGTGGACCGTAGATTGCAATTGTGGGGCTAAGGATGATGATGGGGAGAGAATGCTAGCTTGTGACGTATGTGGAGTGTGGCGGCATACTAGGTGTTCTAACATCCGCGACATTGATCCTGTTCCAGCGCGATTCGTTTGCCCAAAATGTCAAAACTCTGACCAAAAGCCCAAGTCTACTGGGCACTGCAAAGAGGTGACAGTGACCAACGTTAGTGCTAGTGGTAGCTGCTTTGGAAATGGCTTGCCAATGCCTTCTGATGTTCGTTAA 2151 0.4937 MVVSGGKPLKRMKRRVTADFYDFLSFPSPSLAAHEGFAGAPFRSAVRSFLTKHALLPPPSALFPHLLTWQILFRVGDVAGEGGAESGGAAAVCLDIVEEDVARSRSVYCDQCRVFGWSGHPVCGKRYHFIIKADGSSIGGYHKPCMCCGDILHLSESKCKSCNHATTTDDVEDWVYHQLENTTHLLHGVVHANGYGHLLRVNGREGGSRYLSGCHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHTIMKGHPWYGDWGYQFGSGSYCLTHEAYKTAVDSLSNLPLSTYLCQGQNSSLPRVQGMISYFQSLSDHELVNVRDLFCFLMGLIHDARNTATKVDDVACKKRRVNDSGLLWYWEKKDIERVEEAMLKVLRAVSGSNWVSSRALRGAVCKLASTELLDYCLGGLGGKVVYGGMVVNARCNPQTGTFEYRLEAANGSSFGIIANNSSGSKYPSKENLLQCLRYLYEALLHPQMMVNYAPEGTRVLAMSSAQKLLDCKQFVKDYTPGMPPMSDLQKIRISCQVELVDEAEDPAAKTPPELIVLPADATVSDVKIEAANAFQDVYLMFRRFQVDELLGYSGVEDPTQVKHLLGSEEPATVCVRGRCMAKNGLSKFRMERGLERWTVDCNCGAKDDDGERMLACDVCGVWRHTRCSNIRDIDPVPARFVCPKCQNSDQKPKSTGHCKEVTVTNVSASGSCFGNGLPMPSDVR 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02331 716 CDD PHD_MMD1_like 632 677 - -
Arst9g02331 716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 618 685 IPR013083 -
Arst9g02331 716 SUPERFAMILY FYVE/PHD zinc finger 621 682 IPR011011 -
Arst9g02331 716 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 13 690 - -
Arst9g02331 716 SMART PHD_3 632 678 IPR001965 -
Arst9g02331 716 ProSitePatterns Uncharacterized protein family UPF0054 signature. 187 197 IPR020549 -
Arst9g02331 716 Pfam PHD-finger 633 679 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02331 Arst-Chr9 83952243 83957268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02331 92 677 PHD Transcription Factor Family AT5G22260 31.161 4.40e-85 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst9g02331 PHD 1.6e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02331 K26271 - gmx:100818189 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g02331 9 83952243 83957268 Arst9g02331 9 83952243 83957268 ECH