Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02325 ATGGAGCCTAATAACTACAATTCTTCTTCTAATGTTGTTGTCACTGATGATGTGAAGAAGCCATTATTAGAAGAGAAAAAGATGGGTACAATAATAAGATACAAAGAATGTCTCAAGAACCATGCAGCTTCACTTGGTGGCAATGCAACTGATGGATGCGGCGAGTTCATGCCCTGTGGTCAACAAGGTACCATTGAAGCTCTCATCTGTTCTGCATGCAATTGCCATAGAAACTTTCACAGGAAAGAGATTCAATCTGAAGCTCATCATCATAAATATCAAGTGGTGAAGCATATTTTTGCACACTCATCAATGAGTCTTTCTGATCAATCTTATGATCATGATCATAACGACAATAAGGATTATTGTGAAAAAGGGGTGGTGAAGATGAAGAAGAGGTTCAGGACAAAGTTCACACAAGAACAGAAGGCCAAGATGCTCGATTTCGCAGAGAAGGCAGGATGGAAGATACAGAAGCTAGATGAATCTATGGTGAACAAGTTTTGCCAAGACCTTGGGATCAAGAGAAGGGTACTCAAGGTTTGGATGCACAATAACAAGAACTCTTTTGCTGCGAAGAATAAACAGAATCTTTCTACAACCACCTAG 609 0.3974 MEPNNYNSSSNVVVTDDVKKPLLEEKKMGTIIRYKECLKNHAASLGGNATDGCGEFMPCGQQGTIEALICSACNCHRNFHRKEIQSEAHHHKYQVVKHIFAHSSMSLSDQSYDHDHNDNKDYCEKGVVKMKKRFRTKFTQEQKAKMLDFAEKAGWKIQKLDESMVNKFCQDLGIKRRVLKVWMHNNKNSFAAKNKQNLSTTT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02325 202 Gene3D - 116 193 - -
Arst9g02325 202 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 33 84 IPR006456 -
Arst9g02325 202 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 20 189 - -
Arst9g02325 202 SUPERFAMILY Homeodomain-like 128 189 IPR009057 -
Arst9g02325 202 NCBIfam homeobox domain, ZF-HD class 131 188 IPR006455 -
Arst9g02325 202 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 34 83 IPR006456 -
Arst9g02325 202 FunFam Zinc-finger homeodomain protein 2 117 192 - -
Arst9g02325 202 Pfam ZF-HD protein dimerisation region 32 84 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02325 Arst-Chr9 83382639 83383410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02325 18 198 ZF-HD Transcription Factor Family AT1G14440 49.057 2.84e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Arst9g02325 ZF-HD_dimer 5.4e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g02325 9 83382639 83383410 Arst9g02325 9 83382639 83383410 ECH