Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02228 ATGGACACAGCTCAGTGGCCACAGATTGTGGTGAAGCCAATAGAAGAGATAGTTGTGGGAACAAACACATCATCATGTCATCAATCAAAACCACCATCTTCTAATAATCTTGCATCAGAGAATAATAACAACAACAATACCATCAAGAAACCAAGGCCACAGAAAGAGCAAGCCCTAAACTGTCCAAGGTGCCATTCAACAAACACAAAGTTCTGTTACTACAACAACTACAGCCTTACACAACCAAGGTACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGTGGGTCCCTTAGGAACATCCCTGTTGGTGGTGGATCCAGAAAGAACAAGAGATCTTCTACTTCAATATCATCATCACCGTCACCGCCTTCACCCAACAAGAACATTAAGCTTATTGGTAAGGTAGTCCATCAAGGCCAAGATCTGAACTTGGCTTTTCCGTCTGATTTGGTTGTTCATCAACAAAACAATAACAACAACAATAATACTCTTTCTTCTTCTTCTTCTTCTTCAACTATTACTAGTACTGTTACTACTACTACTACTACTACACCACCCTCTTCTACTACTCAATTCTCAGCAATGGAGCTTCTTACTGGGATCACTTCAGCAAATTCAAGAGGGGGTTTGGGTTTGAACTCTTTCTTGCCTCATCATCCACCTGATCCAAACACAGTGCTGTACAATAATAGTACTTTTGCTCTTCAGGATTTCAATAAGACAGCAGGATTGAATTTCTCTTTGGATGGGATTGGGATTGGGATTGTAGGGAGTGGATTTGCAGGCCTTCATCATCATCAACAAGATCAGACAAGTGGTGGTGGGAATAATAATGGGAGACTTTTGTTTCCATTTGAGGATTTGAATCAGGTTTCTAACGCCGACGCAATTGATCATCAGAGTAATAGCAAGGTCCATCAACAAGGGGATTCAAGTGGATATTGGAGTGGGATGTTAGGTGGAGGATCATGGTAA 981 0.4139 MDTAQWPQIVVKPIEEIVVGTNTSSCHQSKPPSSNNLASENNNNNNTIKKPRPQKEQALNCPRCHSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSTSISSSPSPPSPNKNIKLIGKVVHQGQDLNLAFPSDLVVHQQNNNNNNNTLSSSSSSSTITSTVTTTTTTTPPSSTTQFSAMELLTGITSANSRGGLGLNSFLPHHPPDPNTVLYNNSTFALQDFNKTAGLNFSLDGIGIGIVGSGFAGLHHHQQDQTSGGGNNNGRLLFPFEDLNQVSNADAIDHQSNSKVHQQGDSSGYWSGMLGGGSW 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02228 326 MobiDBLite consensus disorder prediction 22 53 - -
Arst9g02228 326 ProSiteProfiles Zinc finger Dof-type profile. 59 113 IPR003851 GO:0003677|GO:0006355
Arst9g02228 326 ProSitePatterns Zinc finger Dof-type signature. 61 97 IPR003851 GO:0003677|GO:0006355
Arst9g02228 326 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 231 IPR045174 GO:0003700|GO:0006355
Arst9g02228 326 MobiDBLite consensus disorder prediction 100 131 - -
Arst9g02228 326 MobiDBLite consensus disorder prediction 108 128 - -
Arst9g02228 326 MobiDBLite consensus disorder prediction 300 326 - -
Arst9g02228 326 MobiDBLite consensus disorder prediction 22 58 - -
Arst9g02228 326 MobiDBLite consensus disorder prediction 300 316 - -
Arst9g02228 326 MobiDBLite consensus disorder prediction 155 192 - -
Arst9g02228 326 Pfam Dof domain, zinc finger 57 113 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02228 Arst-Chr9 75924753 75926862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02228 1 326 C2C2-Dof Transcription Factor Family AT4G24060 39.722 3.87e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst9g02228 zf-Dof 4.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02228 - - adu:107465965 570.081