Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02217 ATGGCTGAACTGCATGTCAGGCACAGAGAAATGTGCCTTGATGTTGATAACATGTCTTATGAGGAATTATTGGCATTGGAGGAGCGAATTGGAGATGTCAGCACTGGATTGAGCAAGGATGTCATTATAAAGTCGATGAAACAGCAAATATACATGTCTGTTATGGCGGAGTCTTCTACAGATCTTGAGCCTTGTTGTATCTGTCAGGAGGATTATACTGAAGGAGAGAGTGTTGGCTCGCTAGATTGTGGACATAAATTTCACAGTAATTGCATTGGCTACACAATATGCGGCAGAAGCAACTCTTAG 309 0.4207 MAELHVRHREMCLDVDNMSYEELLALEERIGDVSTGLSKDVIIKSMKQQIYMSVMAESSTDLEPCCICQEDYTEGESVGSLDCGHKFHSNCIGYTICGRSNS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02217 102 Pfam RING-like zinc finger 65 92 IPR001841 -
Arst9g02217 102 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 2 92 IPR045191 GO:0061630
Arst9g02217 102 SUPERFAMILY RING/U-box 42 96 - -
Arst9g02217 102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 101 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02217 Arst-Chr9 74961606 74962746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02217 1 92 C3H Transcription Factor Family AT2G15530 63.158 2.76e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02217 - K19041 adu:107465729 213.386