Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02203 ATGCATCCTCCTAGAGAGGCTTGGAGGCTGAAAGTTAGGGTTCTAAGGCTTTGGGTTGTACCCCCTTTTGGTAACCATGAGGTTCCTAACTCAATGGAGATGATTCTCCTTGATGAGCATTGTGAAAAAATTCAAGCTACAGTCAAGAAACCACTCCTTAATAGGTTTAGGGATCATATAGTTGAAGGACAAGTTTATAGAATGGCATATTTTAGTGTTGTGTCAAATCATGGTAGTTATAGAGCAACTTCTCATGAATTCAAATTGGTTTTTCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACTCAAGATTATGATTTCTTAGTTGATGTCATTGGTCTTTTAACTTCAGTCGGAGAAGAGAAAGAATATGTAAAAGAGGGGAAAATTGTGAAAATGATTGCATTGGAATTAACTTCAAAAGATGTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTTCTTGCCTCTGGGTATGTGGAGCAGCCTGTTGTAGTCATTCAACTTACAAAAGTCAAGTTCTTTAGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATATTATTTAATCCTGATATTCCTGAAGTTGTTGAATTTAGGCAGAGTATGATTGAGCAAGGTGTCAGTGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTCTCTCCTTGGAAGATGATTTCATGCGTTTAACTAGAAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATTTTTGGTGCAATCCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCCTATTACTGTGATTTTTGTTTGAAGCACATAACTAATATCACTCCAAGATTTAAAATTAAAGTAACAGTTGAAGATCATACTGGGGAGGGTATTTTCCTTCTCTTTGATCGTGAGGCTTCTTATTTGCTTAAGAAATCATGTGCTGACTTGTTTACTGAGGTTCAAAGAGATGCAAGTCTTATATGTGGGGATACTTATCCTCCCATATTCCAATGGATCATTGGAAAGAAGTTGCTGCTCAAGGTTGATACCAAAGGTGTCCCACATGATACATTTTATGGGACTTTCCGAGTTAGGAGAATTTGTGATGATTCCACCATTATTGCGATGTTTGAACTTCCCAATTATGATGCTGATGATGAGTCTACTCCAAAAAAGGAGCATGAGTTACACAAATCTGTTCCTCGTGGAAAAGCGGATGTGGGTATTAAGAAGGAGTCTTCGGATGGTTTTATCAAAAGTGAGAAAGATGATGGTGAGTGTTCTGGGATTTTGTGTAAATCCCCTGTTCTTATAGATTTTTTGGCTGAAAAACAGCCTGTTGTTTCCGGGGGGACTGAGTTTGTTGGCTTAATTGATGGTGAGCATGGAAAAGAAGAGAAAACTCCCAGCAATGATCTTTCTGCTGAACTGGATATATTGCTTAGCTCAGCAGAAAAAGTAACTCAGGAGCTGTTGTCCCATGTTCTTGAAGCACCTTCGCAAAATGGAGAGAAGCTTACCCATGAAAATCATGTTTTCACCTCCAAGAGTAAGAGGAATTTGAATCCTAAATTTGAAGAGGCTTCTGTTAATGCAGATGGGCGTGGGTTCAAGGTTGCCAAGGTTAATGGAGTTTGA 1773 0.388 MHPPREAWRLKVRVLRLWVVPPFGNHEVPNSMEMILLDEHCEKIQATVKKPLLNRFRDHIVEGQVYRMAYFSVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFPFSELLNMTQDYDFLVDVIGLLTSVGEEKEYVKEGKIVKMIALELTSKDVTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLTKVKFFRGQVGLQNVMYATQILFNPDIPEVVEFRQSMIEQGVSGTQPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGAIQGIVEDGGWWYSACVCGKGIYPQNGAYYCDFCLKHITNITPRFKIKVTVEDHTGEGIFLLFDREASYLLKKSCADLFTEVQRDASLICGDTYPPIFQWIIGKKLLLKVDTKGVPHDTFYGTFRVRRICDDSTIIAMFELPNYDADDESTPKKEHELHKSVPRGKADVGIKKESSDGFIKSEKDDGECSGILCKSPVLIDFLAEKQPVVSGGTEFVGLIDGEHGKEEKTPSNDLSAELDILLSSAEKVTQELLSHVLEAPSQNGEKLTHENHVFTSKSKRNLNPKFEEASVNADGRGFKVAKVNGV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02203 590 Gene3D - 1 102 IPR012340 -
Arst9g02203 590 Gene3D - 256 420 IPR012340 -
Arst9g02203 590 SUPERFAMILY Nucleic acid-binding proteins 3 102 IPR012340 -
Arst9g02203 590 MobiDBLite consensus disorder prediction 431 450 - -
Arst9g02203 590 SUPERFAMILY Nucleic acid-binding proteins 264 415 IPR012340 -
Arst9g02203 590 Pfam Domain of unknown function DUF223 33 124 IPR003871 -
Arst9g02203 590 PANTHER OS03G0429900 PROTEIN 3 396 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst9g02203 590 SUPERFAMILY Nucleic acid-binding proteins 110 232 IPR012340 -
Arst9g02203 590 Pfam Replication factor-A C terminal domain 283 367 IPR013955 -
Arst9g02203 590 CDD RPA1_DBD_A_like 9 97 - -
Arst9g02203 590 CDD RPA1_DBD_B_like 130 233 - -
Arst9g02203 590 CDD RPA1_DBD_C 267 410 IPR047192 -
Arst9g02203 590 Gene3D - 104 240 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02203 Arst-Chr9 73578074 73580912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02203 1 361 Core DNA Replication Machinery Family AT5G08020 25.000 5.01e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02203 - - ahf:112744598 1036.94