Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02167 ATGTCCATAAACGAGGTTGATGTGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGTAGAAGATGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTAGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACACTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACATGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGGTGGAGGAATGTGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGATTATGGCTACGGTATATGGAAGAAGGGTGGATATCGTCATGCTGGCTTCACATGCAAAGATTTGTACAACCACATTGATCGTTATCGTCAGTCGAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTCGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCAACTATCACTGCTTTGGGGATATTGTTGCCTTTGATTCAACCTCCAAGAAGAATAAATACAACAAGCCTTTTGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATATTCAGCTTCGGCCTACTATCCGACGAAAGCACAGAGACGTATAAGTGGTTGTTGGAAACTTTTGTTGAAGCGATGGGTGGGAAAAGTCCTAAAGCAGTAATAACTGAAGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCAGTTATGCGGATGGCATTTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTTCTGCGCGATTTTAAGTGTCTTATATACGACAACAACGACCACAGAGAGTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCGTGCGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAATACGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGATTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAATGAATTAATAGCTGACTTTAAGTCTCAGCTCTCAGAGCCAGTGATGATTACGTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATCAAGGTACTAAGCACAACCTTGGACAAGGTCGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAAAATCTGTTCTCGTGCTCGTGCAAGATGTTTGAATCACGTGGTATTCCGTGTAGTCATGTCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATCTACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTATCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGTGCATTAGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGTAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCACCTGCAGTCACGCAAACAAGGTAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCCTTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAAACCTCACAATCGATCAGACGGCAATGCATCAGCCAAGGACTCAGTTTTTAGTCCAGAAAGGTTTGGTAATTCTTTGAGGTCGATCTCAGTTAAGTCCGAACACCACTTAGGACCTAAGACGAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGATAACACTTTTGATGAGCGGAGCCTCCATGAAAGCAGTGAATCCATTGACATCGTGTCCACGAATGGTTTTTTTAACAAAAATGTCTACTTGTTAACACAGGTAAAGGAGCCACAGCAGGACAAGAGACATTCATTCATGAACTATGAATGCGTTAATGATGTCATTGATGAGAAATGTGACACACCACATGTGCAGATCGATGTCCGAGATCCGTTACCATCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGCGTCGATGCATAGGACACTTTGA 2532 0.4265 MSINEVDVKNDSDNDLGDDFDYQPNVEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNTYSCWHGFVMRKDDMVRDNQGRIISRQLVCNKEGWRNVRYLDLDDRSREARSLTRTKCPARLRVKLDYGYGIWKKGGYRHAGFTCKDLYNHIDRYRQSKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIINYHCFGDIVAFDSTSKKNKYNKPFVIFSGCNHHGQTVIFSFGLLSDESTETYKWLLETFVEAMGGKSPKAVITEGDLAMRDAIKNVLPDATHQLCGWHLQRNACENIKNPNFLRDFKCLIYDNNDHREFDRRWAAILDKHNLVGSTWMEKTYETRAMWSHCFLRDKFFGYIRTTSQYEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQLSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNIKVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKMFESRGIPCSHVFCAMKFENILEFPDSLIYKRWTKNAKNEFIITEMPVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIHLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGKPHNRSDGNASAKDSVFSPERFGNSLRSISVKSEHHLGPKTKPFKKGGTRKFTATGMRNRKGKDNTFDERSLHESSESIDIVSTNGFFNKNVYLLTQVKEPQQDKRHSFMNYECVNDVIDEKCDTPHVQIDVRDPLPSSLPCGNKQGSYMALFASMHRTL 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02167 843 ProSiteProfiles Zinc finger SWIM-type profile. 508 544 IPR007527 GO:0008270
Arst9g02167 843 MobiDBLite consensus disorder prediction 1 42 - -
Arst9g02167 843 SUPERFAMILY Retrovirus zinc finger-like domains 646 678 IPR036875 GO:0003676|GO:0008270
Arst9g02167 843 MobiDBLite consensus disorder prediction 719 754 - -
Arst9g02167 843 SMART 26again6 519 546 IPR006564 GO:0008270
Arst9g02167 843 MobiDBLite consensus disorder prediction 740 754 - -
Arst9g02167 843 MobiDBLite consensus disorder prediction 17 39 - -
Arst9g02167 843 Pfam FAR1 DNA-binding domain 74 150 IPR004330 -
Arst9g02167 843 ProSiteProfiles Zinc finger CCHC-type profile. 660 675 IPR001878 GO:0003676|GO:0008270
Arst9g02167 843 Pfam MULE transposase domain 231 325 IPR018289 -
Arst9g02167 843 PANTHER OS01G0519700 PROTEIN 58 146 - -
Arst9g02167 843 Pfam SWIM zinc finger 520 536 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02167 Arst-Chr9 69257902 69260878 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst9g02167 MULE 5.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02167 - - ahf:112755379 1449.11