Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02136 ATGGAAGTTATGTCTTTTTCTGTCACATTCACCCAATTTCATACATTTTCCTTTCTGAAACCAAAAGTAACAACAACCGAAATTCAGGGCCTTTCACTACCCAATAATAGGAGCAAACATTGCAATCTTTATTCATTTTCTTCTTCATCTTCAAGAAGTATAGCAGCAACAGCAACACTATACCCTTCCACCACCCAGAAGAACCGCTACTGGATGGTACTCATGGAGCCTCCACCTCATGGTGTCACCTCCAAGTCACAACTCATCGATTATTACGCCAACACTCTACACAAAGTCCTTGCCAGTGAGAGAGATGCTCAAATGTGTATATATGATGCTTCCTGCGATACACACTTTGGTTTCTGTTGTGACATTGATCCACAAATAACCTCCCAACTCACAAGTTTACCGGGGGTCTTGTTGGTTAGGCCTGATCCGGATTTCAGTTCTTCGAAAAAGGACTATAGTCTATCAAGTGGTCAAGAAGGTCTGCTATCGAATTCAAAACTACAATTTGAAACCAACATGTTATTCTTTCTTGAGAATTCAAAGCATTGGCTTGTTAGAATTGATAAACCTGCTGTTGGGATTGTTACAAAGGCTCAGATTGTCGATTATTTTGTTCAAATATTGACCAAGGTGATGGGAAATGAAAAGGATGCTCAGATGTGCATATATCATGTTTCCTGGAAAAAAATATTTGGTTTTTGCTGTGAACTTGATGACGACTGTGCACAGGAGTTAGTTGTTCAACCAGATAATAATTTTGAGTCAGCAAATAAGGATTATGAAGGGCTATCGTTTTATACATCTGAGAAAACCTTACGTGCAGCATTTGAAGGCTTTGGTGATCTTGTTGAAGTCAAAATTATTATGGATAAAATTTCCAAAAGGTCCAAGGGTTATGCATTTATTGAGTACACCACGGAGGAGGCTGCAAGCGCAGCATTGAAAGAGATGAATGGCCAGATTATTAATGGATGGATGATAGTAGTGGATGTTGCCAAGACTAACCCGCCAAGGCACAACAGGGGTCATGTCAGGCCATCAGTTTGA 1056 0.3996 MEVMSFSVTFTQFHTFSFLKPKVTTTEIQGLSLPNNRSKHCNLYSFSSSSSRSIAATATLYPSTTQKNRYWMVLMEPPPHGVTSKSQLIDYYANTLHKVLASERDAQMCIYDASCDTHFGFCCDIDPQITSQLTSLPGVLLVRPDPDFSSSKKDYSLSSGQEGLLSNSKLQFETNMLFFLENSKHWLVRIDKPAVGIVTKAQIVDYFVQILTKVMGNEKDAQMCIYHVSWKKIFGFCCELDDDCAQELVVQPDNNFESANKDYEGLSFYTSEKTLRAAFEGFGDLVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGQIINGWMIVVDVAKTNPPRHNRGHVRPSV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02136 351 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 59 156 IPR039206 GO:0016554
Arst9g02136 351 Gene3D - 264 350 IPR012677 -
Arst9g02136 351 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 52 149 IPR037045 -
Arst9g02136 351 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 265 337 IPR000504 GO:0003723
Arst9g02136 351 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 265 327 IPR000504 GO:0003723
Arst9g02136 351 SUPERFAMILY RNA-binding domain, RBD 265 347 IPR035979 GO:0003676
Arst9g02136 351 SMART rrm1_1 265 333 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02136 Arst-Chr9 67624221 67633539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02136 256 341 C2H2 Transcription Factor Family AT2G19380 31.183 8.13e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02136 - - gmx:100791652 447.588