Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02135 ATGGAAGTTATGTCTTTTTCTGTCACATTCACCCAATTTCATACATTTTCCTTTCTGAAACCAAAAGTAACAACAACCGAAATTCAGGGCCTTTCACTACCCAATAATAGGAGCAAACATTGCAATCTTTATTCATTTTCTTCTTCATCTTCAAGAAGTATAGCAGCAACAGCAACACTATACCCTTCCACCACCCAGAAGAACCGCTACTGGATGGTACTCATGGAGCCTCCACCTCATGGTGTCACCTCCAAGTCACAACTCATCGATTATTACGCCAACACTCTACACAAAGTCCTTGCCAGTGAGAGAGATGCTCAAATGTGTATATATGATGCTTCCTGCGATACACACTTTGGTTTCTGTTGTGACATTGATCCACAAATAACCTCCCAACTCACAAGTTTACCGGGGGTCTTGTTGGTTAGGCCTGATCCGGATTTCAGTTCTTCGAAAAAGGACTATAGTCTATCAAGTGGTCAAGAAGGTCTGCTATCGAATTCAAAACTACAATTTGAAACCAACATGTTATTCTTTCTTGAGAATTCAAAGCATTGGCTTGTTAGAATTGATAAACCTGCTGTTGGGATTGTTACAAAGGCTCAGATTGTCGATTATTTTGTTCAAATATTGACCAAGGTGATGGGAAATGAAAAGGATGCTCAGATGTGCATATATCATGTTTCCTGGAAAAAAATATTTGGTTTTTGCTGTGAACTTGATGACGACTGTGCACAGGAGTTAGTTGTTCAACCAGATAATAATTTTGAGTCAGCAAATAAGGATTATGAAGGTAATAACTTAGAAAACAGTTTGAGTGTGCAAAAATCTTTTGAAACAAGTCAGGCAGCTCCCCTGCAAACGAAAAAGCTTTTTGTGACAGGGCTATCGTTTTATACATCTGAGAAAACCTTACGTGCAGCATTTGAAGGCTTTGGTGATCTTGTTGAAGTCAAAATTATTATGGATAAAATTTCCAAAAGGTCCAAGGGTTATGCATTTATTGAGTACACCACGGAGGAGGCTGCAAGCGCAGCATTGAAAGAGATGAATGGCCAGATTATTAATGGATGGATGATAGTAGTGGATGTTGCCAAGACTAACCCGCCAAGGCACAACAGGGGTCATGTCAGGCCATCAGTTTGA 1146 0.3979 MEVMSFSVTFTQFHTFSFLKPKVTTTEIQGLSLPNNRSKHCNLYSFSSSSSRSIAATATLYPSTTQKNRYWMVLMEPPPHGVTSKSQLIDYYANTLHKVLASERDAQMCIYDASCDTHFGFCCDIDPQITSQLTSLPGVLLVRPDPDFSSSKKDYSLSSGQEGLLSNSKLQFETNMLFFLENSKHWLVRIDKPAVGIVTKAQIVDYFVQILTKVMGNEKDAQMCIYHVSWKKIFGFCCELDDDCAQELVVQPDNNFESANKDYEGNNLENSLSVQKSFETSQAAPLQTKKLFVTGLSFYTSEKTLRAAFEGFGDLVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGQIINGWMIVVDVAKTNPPRHNRGHVRPSV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02135 381 Gene3D - 255 380 IPR012677 -
Arst9g02135 381 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 59 156 IPR039206 GO:0016554
Arst9g02135 381 SMART rrm1_1 290 363 IPR000504 GO:0003723
Arst9g02135 381 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 291 357 IPR000504 GO:0003723
Arst9g02135 381 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 52 149 IPR037045 -
Arst9g02135 381 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 289 367 IPR000504 GO:0003723
Arst9g02135 381 SUPERFAMILY RNA-binding domain, RBD 280 377 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02135 Arst-Chr9 67624221 67633539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02135 289 371 C2H2 Transcription Factor Family AT2G19380 32.530 3.64e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02135 - - gmx:100791652 501.901