Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02134 ATGGAAGTTATGTCTTTTTCTGTCACATTCACCCAATTTCATACATTTTCCTTTCTGAAACCAAAAGTAACAACAACCGAAATTCAGGGCCTTTCACTACCCAATAATAGGAGCAAACATTGCAATCTTTATTCATTTTCTTCTTCATCTTCAAGAAGTATAGCAGCAACAGCAACACTATACCCTTCCACCACCCAGAAGAACCGCTACTGGATGGTACTCATGGAGCCTCCACCTCATGGTGTCACCTCCAAGTCACAACTCATCGATTATTACGCCAACACTCTACACAAAGTCCTTGCCAGTGAGAGAGATGCTCAAATGTGTATATATGATGCTTCCTGCGATACACACTTTGGTTTCTGTTGTGACATTGATCCACAAATAACCTCCCAACTCACAAGTTTACCGGGGGTCTTGTTGGTTAGGCCTGATCCGGATTTCAGTTCTTCGAAAAAGGACTATAGTCTATCAAGTGGTCAAGAAGGTCTGCTATCGAATTCAAAACTACAATTTGAAACCAACATGTTATTCTTTCTTGAGAATTCAAAGCATTGGCTTGTTAGAATTGATAAACCTGCTGTTGGGATTGTTACAAAGGCTCAGATTGTCGATTATTTTGTTCAAATATTGACCAAGGTGATGGGAAATGAAAAGGATGCTCAGATGTGCATATATCATGTTTCCTGGAAAAAAATATTTGGTTTTTGCTGTGAACTTGATGACGACTGTGCACAGGAGTTAGTTGGTGTGCCTGGTGTCTTATCAGTTCAACCAGATAATAATTTTGAGTCAGCAAATAAGGATTATGAAGGGCTATCGTTTTATACATCTGAGAAAACCTTACGTGCAGCATTTGAAGGCTTTGGTGATCTTGTTGAAGTCAAAATTATTATGGATAAAATTTCCAAAAGGTCCAAGGGTTATGCATTTATTGAGTACACCACGGAGGAGGCTGCAAGCGCAGCATTGAAAGAGATGAATGGCCAGATTATTAATGGATGGATGATAGTAGTGGATGTTGCCAAGACTAACCCGCCAAGGCACAACAGGGGTCATGTCAGGCCATCAGTTTGA 1077 0.402 MEVMSFSVTFTQFHTFSFLKPKVTTTEIQGLSLPNNRSKHCNLYSFSSSSSRSIAATATLYPSTTQKNRYWMVLMEPPPHGVTSKSQLIDYYANTLHKVLASERDAQMCIYDASCDTHFGFCCDIDPQITSQLTSLPGVLLVRPDPDFSSSKKDYSLSSGQEGLLSNSKLQFETNMLFFLENSKHWLVRIDKPAVGIVTKAQIVDYFVQILTKVMGNEKDAQMCIYHVSWKKIFGFCCELDDDCAQELVGVPGVLSVQPDNNFESANKDYEGLSFYTSEKTLRAAFEGFGDLVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGQIINGWMIVVDVAKTNPPRHNRGHVRPSV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02134 358 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 59 156 IPR039206 GO:0016554
Arst9g02134 358 Gene3D - 271 357 IPR012677 -
Arst9g02134 358 SUPERFAMILY RNA-binding domain, RBD 272 354 IPR035979 GO:0003676
Arst9g02134 358 SMART rrm1_1 272 340 IPR000504 GO:0003723
Arst9g02134 358 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 272 334 IPR000504 GO:0003723
Arst9g02134 358 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 52 149 IPR037045 -
Arst9g02134 358 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 180 264 IPR037045 -
Arst9g02134 358 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 272 344 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02134 Arst-Chr9 67624221 67633539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02134 263 348 C2H2 Transcription Factor Family AT2G19380 31.183 8.49e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02134 - - vun:114191397 467.618