Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02029 ATGTGTGAGATCAGCGTTGCACCGTACTATGATGGCCACCTGATGGTGCTTGACTGTAGCATGTTTGATAAGACACCTTTTGATCCTTATCATCATCATCACCACCAATTGCAGCTTCACCAAGTTCATCATCAACACCCCAGTATCTTGCACCCATCATTACACCTTCACCAACACCACAACAACAATAACAAACATCATCATCATGATGAAGACCGGGAAGAAAACAACGCTAGCAGTACTTCCACTACTACTGTGCCAATGAATTTTGAAATTGAAAGAGATCATGAGAGGCAGCAAATGCCTCCTCCTCAGCTCATTGATCCTTGGAGTAATGATGAAGTACTTGCTCTCTTGAGGATCAGATCTACCATGGAGAGTTGGTTCCCACAACTCACTTGGGAACATGTCTCAAGGAAGATGGCAGAGCTTGGATATAAGAGGAGTGCTGAGAAGTGCAAAGAGAAGTTTGAAGAAGAAAGCAGATATTTCAGCAGCAACATTAACTTCACCAACAAAACCATTACTCCTCCTCCTACTACTACTACTGGTTACCGCTTTCTTAGTGAACTTGAAGAGCTTTATCATCAACAAGATAATAGTGATCATCATCATCAACAAGAAGTGGTGGTAGTGGAGAAGCAACCAAGTAGTACTGACGGGCAAGAAGACAAGGTAGTCATGGACCAAGCATTGGGAGAAGAAGATGATAAGGAGAATGATGAAGAGGTGGTTGCTGGGGCGGCCGTGGTGGTGTTGCCGGAGAAGATTATTACGACAAAAACAAAGGAGAGGAAGAGGAAGAGGGGTGGTGGAGATGGCGACGGCAACGGCGACGGCGTTAGGTTTGAGATGTTCAAAGGTTTTTGTGAAAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAGTTAATAGAAGATATGGTGAGAAGAGATGAAGAGAAGCTTGCAAGAGAAGAGGCATGGAAGAAGCAAGAGGTGGAGAGAATGAACAAGGAGCTTGAGATCATGCAACAGGAACAAGCCATTGCTGGTGATAGACAAGCAAACATCATTGAGTTCTTGAAGAAATTTGCCCCAGAAATTCAAACCCTTGTTTGTGTTGAAGAAGATCATGATGATCACAATAATAATGGAAGAAACAAATTAGTGAAGGTAACAAATAATAATAACAATGTTGAACACAATGGTTCAAATTTGTTGTTGCATTCCCAAAACCCTAATCCTCCATCATCACCTTCTTCTTCTTCTGCTGTGATTGTGAATAACCAAAATGGTGTTGTTGTTGCTGCTGCTTCTTCTTCAACAAACCCTAGCTCAAGTCCTATTATACAAGCTGGCAAGAACCCTAATAGTACTTATCTCAACAATGATAGCCCAATAGTAGAGGCGGACTCGGCGGCAAAGAAGGCGGCTGCCACGACTGCGAACTGCGAGAAAGATGAAATTGGAAGAAGATGGCCAAAAGATGAAGTGTTGGCACTGATAAACCTGAGGTGCAACACGCAAGTGAGCAGCAACAATGATGAAAATGGGAGAGAAACTCACAAGGCTCTTCCATTGTGGGAGAGAATCTCACAAGGGATGGTTGAATTGGGGTACACAAGGAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAAGATGCTAACAAGAAGAGGTCCCTTGATTCAAGAACTTGTCCCTATTTTCATCTTCTCAGTAGCCTCTATAGCCAAGGGAAGCTTCTTCTCCAACCTGAGAAGCAAGAAACTACTACTAATAATAATGATAACCATGGAAAAAAAATGGTCGGAGATCATCAAACTTCTTCACAAATGGGGTCTGCTATTGCTGCTGATGATAATCATGATCATGGAGGTGAGAATAACAATAATAATAAAGCTTTGATGCAAGCACCTTCTTTGGATTTTGATCAGTTTTAA 1962 0.421 MCEISVAPYYDGHLMVLDCSMFDKTPFDPYHHHHHQLQLHQVHHQHPSILHPSLHLHQHHNNNNKHHHHDEDREENNASSTSTTTVPMNFEIERDHERQQMPPPQLIDPWSNDEVLALLRIRSTMESWFPQLTWEHVSRKMAELGYKRSAEKCKEKFEEESRYFSSNINFTNKTITPPPTTTTGYRFLSELEELYHQQDNSDHHHQQEVVVVEKQPSSTDGQEDKVVMDQALGEEDDKENDEEVVAGAAVVVLPEKIITTKTKERKRKRGGGDGDGNGDGVRFEMFKGFCESIVHKMMEQQEEMHNKLIEDMVRRDEEKLAREEAWKKQEVERMNKELEIMQQEQAIAGDRQANIIEFLKKFAPEIQTLVCVEEDHDDHNNNGRNKLVKVTNNNNNVEHNGSNLLLHSQNPNPPSSPSSSSAVIVNNQNGVVVAAASSSTNPSSSPIIQAGKNPNSTYLNNDSPIVEADSAAKKAAATTANCEKDEIGRRWPKDEVLALINLRCNTQVSSNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKRSLDSRTCPYFHLLSSLYSQGKLLLQPEKQETTTNNNDNHGKKMVGDHQTSSQMGSAIAADDNHDHGGENNNNNKALMQAPSLDFDQF 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02029 653 Gene3D - 491 558 - -
Arst9g02029 653 Gene3D - 110 165 - -
Arst9g02029 653 SMART sant 106 163 IPR001005 -
Arst9g02029 653 SMART sant 487 555 IPR001005 -
Arst9g02029 653 MobiDBLite consensus disorder prediction 55 85 - -
Arst9g02029 653 ProSiteProfiles Myb-like domain profile. 109 161 IPR001005 -
Arst9g02029 653 MobiDBLite consensus disorder prediction 393 422 - -
Arst9g02029 653 CDD GT1 489 560 - -
Arst9g02029 653 MobiDBLite consensus disorder prediction 596 623 - -
Arst9g02029 653 Pfam Myb/SANT-like DNA-binding domain 108 165 IPR044822 -
Arst9g02029 653 Pfam Myb/SANT-like DNA-binding domain 489 581 IPR044822 -
Arst9g02029 653 PANTHER FI21293P1 58 639 - -
Arst9g02029 653 Coils Coil 324 344 - -
Arst9g02029 653 MobiDBLite consensus disorder prediction 596 653 - -
Arst9g02029 653 ProSiteProfiles Myb-like domain profile. 490 553 IPR001005 -
Arst9g02029 653 FunFam Trihelix transcription factor GT-2 110 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02029 Arst-Chr9 59090741 59097545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02029 109 585 Trihelix Transcription Factor Family AT5G28300 43.615 1.44e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst9g02029 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02029 - - ahf:112775947 952.584