Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01996 ATGAAAACAGCCACTGATGTAATTATCAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGATAAAAGTGGAAGAATCTCAGGAGCAGCCATCAGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAAGTTAATGATCCTGAACGCAACTATCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAGATACAAATTAGGAAGTCCTAAAACTTTTCACTACCTTAACCAGTCAAAATGCTATGAACTGGCTGACGTAAGTGATGCTCGTGAGTTTCTTGCCACCCGTAGAGCTATGGATATTGTTGGAATCAGCCAAAAGGATCAGGAAGCCATTTTTAGAGTTGTTGCTTCAATTCTCCATCTTGGTAATATTGACTTTACCAAAGGAAAAGAAGTTGACTCATCAGTTCCGAAAGATGACAAAGCCAAATTCCACCTTCAAACTACTGCTGAGCTTCTAATGTGTGATGCCAATGCTTTGCAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAACAGTGAGTAGAGATGGACTGGCAAAAACAATTTATTCTCGGCTGTTCGACTGGTTGGTGGACAAGATTAATAGTTCAATTGGACAAGACCCCAATTCTAAAACTTTGATTGGAGTCCTTGACATATATGGTTTTGAAAGTTTTAAAACTAACAGTTTTGAACAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAACAGCATTTCAATCAGCACGTTTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAAATTAATTGGAGCTACATTGAATTTGTTGATAACCAAGATGTTTTAGACCTTATTGAAAAGAAACCTGGAGGAATCATTGCTCTCCTAGATGAAGCTTGCATGTTTCCAAAGTCTACGCATGAAACTTTTGCAAACAAGCTTTATCAAACATTTAAGAACCACAGGCGCTTTATTAAGCCAAAATTGTCTCGAACAGATTTCACGATTGCTCACTATGCTGGGGAGGTTTTATACCAGTCTGATCAATTTCTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGAGTGCTTCCAAATGTCCTTTTGTAGCTGGCCTTTTTCCACCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGTTTTAAGCTACAACTACAAAGTCTAATGGACACATTAAATTCTACAGAACCCCATTACATCAGATGTGTGAAACCAAATAACCTCTTGAAGCCTGCTATTTTTGAGAATGCCAACATTATGCAACAACTTCGCTGTGGTGGTGTTTTAGAGGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGCGCTTTTTTTGAATTTGTGAACAGATTTGGCCTTCTTGCTCCAGAGGCCACAGAAGCAAACTATGATGAAAAGACTGCTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAGTGGATATCAGATTGGAAAGACAAAGGTATTTCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACGTAGAGCTCAAGTACTCAGTAATGCAGCAAAAAGTATCCAGCGGCGCATAAGAACTCATCAAGCACGTAATCATTATCTTGCGCTTCGAAAGAAGACCATATATCTGCAGTCTCAGTGGAGAGGAAGACTTGCATGCAAACTATATGAAAACATGAGAAAGGAGGCTGCTGCTGTGAAAATCCAAAAGAACACACGCAGATATCAAGCTCGGAGAGCCTACAAGAAACTTCATATGTCAGCATTGACAGTTCAAACAGCTTTAAGGGCAACAGCTGCTCGCAAGGAGTTCAGATTTAGGAAGCAGACCAAAGCCTCCATTATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCATTATATTATAAGAGGCTCAAGAAAGGGACCATAGTTACACAATGCAGATGGAGGGGACGTGTAGCCAGAAGAGAACTTAGGAAACTAAAAATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCGAAGGATAAGCTTGAGAAACGTGTGGAGGAACTCACTTGGCGTCTCCAGCTAGAAAAAGGATTAAGGACGAATCTAGAAGAATCCAAATCTCAAGAGATAGCAAAACTGCAGAATCAATTGCAGGAGATGCAGAGCAAATTTGAGGAGACCAATGCTCTGCTTTCCAAGGAGCGTGAGAATGCAAAGAAAATTAGTATAGAAGCAGTTCCTGTTATTCAAGAGAAACAGGTTATCGTTGAAGATACACAGAAGATTGACGCACTGACGGCAGAAATTGAGAGCCTAAAGACGTCACTCGAGTCAGAGAAACAGAAATCTAATGACTTTGAACAAAAATATAATGAAGCCCAAGCTAGCAGTGAAGAAAGAGGTAAAAAGTTAGAAGACACAGAGAAGAAGGTTCGTCAACTCCAAGAATCATTGAAGGGGCTAGAAGAGAAGATTAATAATGTAGAATCAGAGAATCAGGTTCTGCGTCAACAAGCTGTATCGACTAAGTTCCTTCATAGACGCCAGAGCTCACTTGCCCAGAGAGAGAGGGCTGCTGAAAGTGCTCATAATAGTATTGCAGTGGAGGGGAAGCCACAAGTGACTAATCAGGAACTTCAAACTAGCCCATCAATGAACCTGAGGGAATCCTCTGAAGTGGATGATAAACCACAGAAGTCACTAAATGAGAAACAACAAGAGAATCAAGAATTACTCATTAGATGCATTGCACAACATCTAGGATTTGCTGGAAACAGACCAATTGCTGCCTGTATCATATATAAGTGCCTCTTGCATTGGAGATCATTTGAAGTTGAGCGCACTAGCGTTTTCGATAGAATCATCCAGACTATTGGCCATGCAATTGAGACCCAGGATAATAATGATGTCTTAGCTTACTGGTTATCCAATGCCTCGACACTTCTCTTGTTACTCCAACGCACACTCAAGGCAAGTGGTGCTGCTGGAATGGCTCCACAACGCCGTCGTTCTCAATCAGCAACCCTATTTGGGAGGATGACTCAGAGTTTCCGTGGAAGTCCAGCAGGAGTCAATCTGTCCTTAATTAATGGTAGTTCAAGTAGAGGAGTAGATACATTAAGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGAATGATTCGTGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGATTGTGCATTCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCGTCACGTTCTGTTGCAAACACTGAAGCCCAGCGAGCTTTGATTGCTCATTGGCAGGGGATCGTTAAGAGCCTAGGGAACTTTTTAAATACATTGAAAGCAAATCATGTTCCACCATTTTTGGTTCGTAAGGTGTTCACGCAAATTTTTTCTTTCATCAATGTACAACTATTCAATAGTCTTCTTCTTAGACGAGAGTGTTGCTCATTTAGTAATGGAGAATATGTAAAAGCTGGTTTGGCTGAACTAGAGCATTGGTGTTATAAGGCAACGGATGAGTATGCAGGTTCCGCTTGGGATGAGCTCAAACATATTAGACAAGCCATTGGATTTCTGGTTATACATCAAAAACCGAAGAAGACACTGGATGAAATAAGTCATGACCTGTGCCCAGTCCTCAGTATACAGCAGTTATATCGGATTAGCACCATGTATTGGGATGACAAATATGGCACGCATAGTGTGTCACCTGAAGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATTTCAAAGTCAATGGAACAAATAGATATCTCTGATATAGATCCACCGCCACTTATACGGGAAAACTCCGGGTTTAGCTTTTTATTACCACGCCCAGCTTGA 3999 0.4079 MKTATDVIISRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIERYKLGSPKTFHYLNQSKCYELADVSDAREFLATRRAMDIVGISQKDQEAIFRVVASILHLGNIDFTKGKEVDSSVPKDDKAKFHLQTTAELLMCDANALQDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKTLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHRRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFGLLAPEATEANYDEKTACQKILEKMGLSGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKSIQRRIRTHQARNHYLALRKKTIYLQSQWRGRLACKLYENMRKEAAAVKIQKNTRRYQARRAYKKLHMSALTVQTALRATAARKEFRFRKQTKASIIIQARWRCHKAALYYKRLKKGTIVTQCRWRGRVARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKGLRTNLEESKSQEIAKLQNQLQEMQSKFEETNALLSKERENAKKISIEAVPVIQEKQVIVEDTQKIDALTAEIESLKTSLESEKQKSNDFEQKYNEAQASSEERGKKLEDTEKKVRQLQESLKGLEEKINNVESENQVLRQQAVSTKFLHRRQSSLAQRERAAESAHNSIAVEGKPQVTNQELQTSPSMNLRESSEVDDKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSQSATLFGRMTQSFRGSPAGVNLSLINGSSSRGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPEVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIDPPPLIRENSGFSFLLPRPA 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01996 1332 Gene3D - 49 107 - -
Arst9g01996 1332 Pfam IQ calmodulin-binding motif 582 601 IPR000048 GO:0005515
Arst9g01996 1332 Pfam IQ calmodulin-binding motif 534 552 IPR000048 GO:0005515
Arst9g01996 1332 Pfam IQ calmodulin-binding motif 629 649 IPR000048 GO:0005515
Arst9g01996 1332 Pfam IQ calmodulin-binding motif 653 672 IPR000048 GO:0005515
Arst9g01996 1332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 582 IPR027417 -
Arst9g01996 1332 Gene3D - 236 420 - -
Arst9g01996 1332 Coils Coil 709 747 - -
Arst9g01996 1332 SMART MYSc_2a 1 530 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst9g01996 1332 MobiDBLite consensus disorder prediction 861 914 - -
Arst9g01996 1332 FunFam Myosin 2 109 224 - -
Arst9g01996 1332 Gene3D - 464 530 - -
Arst9g01996 1332 ProSiteProfiles IQ motif profile. 651 680 IPR000048 GO:0005515
Arst9g01996 1332 MobiDBLite consensus disorder prediction 878 898 - -
Arst9g01996 1332 PRINTS Myosin heavy chain signature 226 254 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst9g01996 1332 PRINTS Myosin heavy chain signature 279 307 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst9g01996 1332 ProSiteProfiles IQ motif profile. 580 609 IPR000048 GO:0005515
Arst9g01996 1332 Pfam DIL domain 1151 1254 IPR002710 -
Arst9g01996 1332 FunFam Myosin heavy chain 49 104 - -
Arst9g01996 1332 ProSiteProfiles IQ motif profile. 603 632 IPR000048 GO:0005515
Arst9g01996 1332 Coils Coil 674 701 - -
Arst9g01996 1332 SMART DIL_2 1150 1257 IPR002710 -
Arst9g01996 1332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 582 680 IPR027417 -
Arst9g01996 1332 Gene3D Myosin VI head, motor domain, U50 subdomain 109 398 - -
Arst9g01996 1332 Pfam Myosin head (motor domain) 10 517 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst9g01996 1332 ProSiteProfiles IQ motif profile. 555 584 IPR000048 GO:0005515
Arst9g01996 1332 Gene3D Kinesin motor domain 9 459 IPR036961 -
Arst9g01996 1332 ProSiteProfiles IQ motif profile. 628 655 IPR000048 GO:0005515
Arst9g01996 1332 Gene3D - 582 629 - -
Arst9g01996 1332 Gene3D - 630 679 - -
Arst9g01996 1332 Gene3D - 531 581 - -
Arst9g01996 1332 MobiDBLite consensus disorder prediction 784 818 - -
Arst9g01996 1332 FunFam Class V myosin 236 374 - -
Arst9g01996 1332 SMART iq_5 602 624 IPR000048 GO:0005515
Arst9g01996 1332 SMART iq_5 627 649 IPR000048 GO:0005515
Arst9g01996 1332 SMART iq_5 531 553 IPR000048 GO:0005515
Arst9g01996 1332 SMART iq_5 650 672 IPR000048 GO:0005515
Arst9g01996 1332 SMART iq_5 579 601 IPR000048 GO:0005515
Arst9g01996 1332 SMART iq_5 554 576 IPR000048 GO:0005515
Arst9g01996 1332 Coils Coil 765 848 - -
Arst9g01996 1332 CDD MyosinXI_CBD 913 1298 IPR037975 GO:0007015
Arst9g01996 1332 ProSiteProfiles Dilute domain profile. 962 1275 IPR002710 -
Arst9g01996 1332 PANTHER MYOSIN 10 1264 - -
Arst9g01996 1332 PANTHER MYOSIN 10 1264 - -
Arst9g01996 1332 FunFam unconventional myosin-Va 631 678 - -
Arst9g01996 1332 ProSiteProfiles IQ motif profile. 532 559 IPR000048 GO:0005515
Arst9g01996 1332 MobiDBLite consensus disorder prediction 899 913 - -
Arst9g01996 1332 ProSiteProfiles Myosin motor domain profile. 1 529 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst9g01996 1332 FunFam unconventional myosin-Va 534 582 - -
Arst9g01996 1332 FunFam unconventional myosin-Va 583 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01996 Arst-Chr9 56252308 56263292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01996 10 1329 Myosins gene family AT1G54560 81.179 0.0 2254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01996 K10357 - gmx:100816792 2342