Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01960 ATGTCTTCATCTTTTCCTGTTCTTCCTACATCTGCAGCGCAGGCTTCATCAATAAATTCCAACATCAGAAGTGTTGGTCATATGTTCTCAACCCCTGCTGATTTCCCTGATGATGGCGTGCCATTTCCCACCGCTTCCGAAATCCATGCAACAACACAAGCTTCTCAGCCGCTGCGACAAATTGATGATGTTTCCTGGGGAGCGGATCTGTTCGACAATATTCTTTTGTTTCCTGATAATAACAACGCTCCTTTCCAGAATGATCATACAGTGTATAGTGCTCCATTCTCATCCAGTGATAATCCAAAGGCTGTTGATTTTGAGTGGGTTGATCCCTTCATGTCTGATGATGATCCTCTTCAGCTAAATTGGAACCAGTTTGTCAGTGATACCAATGTAGCAGAGCCAAAACCAAAGGAAAGTCAGTTATCAATACAGCAGCAAGTGCCATCTGTTGAAGCTAACGGTCTTCCAGACTCGGTCTCCACCACACCCCAAACTAAGCAAAGAATGCGTTGGACTCCGGAGCTTCATGAGGCCTTTGTAGAGGCAGTGAATCAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAAGGAGTCTTGAACCTAATGAAAGTTGAAGGCCTTACCATATATCATGTGAAAAGCCACCTTCAGGTGGTTGTTTTTATATCTTTTTCCTTTTTAACTCTTATGAGGACGTGTATTTATTTATCAATTGTTTTTTTTTTTTTTTATGCCCGATACAAACCTGAGCCATCAGAAGGAGCTCCTGAGAAAAAGTTGATGGATTCAATTGAAGAAATGAATCCTCTAGACTTAAAAACGAGTAAGGGGATAACTGAAGCATTGAGGTTGCAGATGGAACTTCAAAAGCGGCTTCATGAACAACTTGAGATACAAAGAAAGTTGCAGATTCAAATTGAAGACCAAGGGAAGCGTCTTCAGATGATGTTTGAAAAACAGATAGAGGGCTCGTCCTCTGCTCCAATATCAAGCACGGGGCAACATACAAATGAAAATTCAGAACCCCAGAACGACGACAATGATAAACAGGAACAGGGAGACGAGCAGTTGGTTGCGCCTCCCCCAAAACGGGTTAAAAGTTTATGA 1110 0.4252 MSSSFPVLPTSAAQASSINSNIRSVGHMFSTPADFPDDGVPFPTASEIHATTQASQPLRQIDDVSWGADLFDNILLFPDNNNAPFQNDHTVYSAPFSSSDNPKAVDFEWVDPFMSDDDPLQLNWNQFVSDTNVAEPKPKESQLSIQQQVPSVEANGLPDSVSTTPQTKQRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQVVVFISFSFLTLMRTCIYLSIVFFFFYARYKPEPSEGAPEKKLMDSIEEMNPLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIEDQGKRLQMMFEKQIEGSSSAPISSTGQHTNENSEPQNDDNDKQEQGDEQLVAPPPKRVKSL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01960 369 Coils Coil 280 300 - -
Arst9g01960 369 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 152 350 IPR044848 GO:0003700
Arst9g01960 369 MobiDBLite consensus disorder prediction 321 341 - -
Arst9g01960 369 NCBIfam myb-like DNA-binding domain, SHAQKYF class 168 219 IPR006447 GO:0003677
Arst9g01960 369 Pfam MYB-CC type transfactor, LHEQLE motif 279 321 IPR025756 -
Arst9g01960 369 MobiDBLite consensus disorder prediction 321 369 - -
Arst9g01960 369 FunFam Myb family transcription factor 167 223 - -
Arst9g01960 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 221 IPR017930 -
Arst9g01960 369 SUPERFAMILY Homeodomain-like 166 219 IPR009057 -
Arst9g01960 369 Gene3D - 167 221 - -
Arst9g01960 369 Pfam Myb-like DNA-binding domain 170 219 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01960 Arst-Chr9 53009411 53014086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01960 20 367 G2-like Transcription Factor Family AT4G28610 41.176 1.63e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst9g01960 Myb_DNA-binding 2.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01960 - - adu:107465812 738.413