Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01952 ATGGCGCCTAATCGTAGAGTTACCAATGCCTATAATGCTATGAGAATCTTAGGCATTTCTGATGATGAGGTGATGCCTGTCTTGAAAAGGTTGCTCAAAGTGTATGGTAATAGCTGGGAGCTTATTGAAGAAGACAATTATCAAACACTTATACATGCATACTTTGAGTCAATGGAATATCAGCAAGAGAAAGGTAAGGGAAAAGCTCCAATCAGTAATCATGATGGAGAAAGAGCAAGACTGAAACTACAGATGATATCTGTAGTGGACAATGAAATACTTTCAAAGACATCCAAAAAGAAAATCATTAAGCCATCTCAGGCATCTAAAGAAGATATGAAACTGGCAAACAGTTCTCAACCATTGCAGACAAGGTTGAGTGAGGTAGAAATTATCTCAAGTTTATCTTGCATGGATGCTAGAGATAGTAAAAAATTGTGCCATGAGAATGCAGCATCTGCAAGGGATTGTGGAGATTCTTTTGATGGATCTAGCCGTTCCCACATCCAGAAGATACATATGTCAAGTAATCGTTATGAGAAAGAACTTATAATATTAAAAGCTAAGAAACCAAAATTACATCTTGAACCTGTTTCATCACATCTAAAAGGCCCTTGTGATGATTCAAATGTAAATCATCGTTTCAAATTTATATCAGCTCTTTATCAAAATGGGCCAAATCCCAATCATGCCAATTTGAGTAACATGGTACAACAAGCTATTGTCCATCCTGAATATAATTCTGCAGGCCCATGCGATGATTCAAACACAAATCGTCATTTCAAATCTATATCATCTCTTTATCAAAATGGGCCAAATCTCAATCATGCGAATTTGACAAACATGGTACAACAAGCTGTTGTTCATCCTGAACATAATTCTAGAGGCCCATGCGATGATTCAAATGTAAATTGTCGTTTCAAATCTATATCAACTCTTTATCAATATGGACCAAATCTCAATCATGCTAATTTGACAAAAATAGCACAAAAAGCTATTGTTCATGCTGAAAATAGTTCTATTCAAATTCTGAGTGACATAACAAAAGGTTCTGAAAAGGTTGCAATTTCATTATTAGATGAAACTGGAAGTGAGGAGTTGCCTAAGTTTAATTACATACCAAATAATATAATCTATCAAAATGCTAATGTGAACATTTCACTTGCTCGGGTTGCGGATGAGGATTGTTGTTCTGATTGTTCAGGCAACTGTCTTTCTTTAACATTTCCTTGTGCATGTTCTCAAGAAACTGGTGGGGAGTTTGCTTATACTCGAGAAGGTTTGGTGAAGGAAAAGTTCTTAGAAGCATGCATAGCTACAAAAATCAAACCTCAACCATATCATTTTGTGTATTGTCAAGAATGCCCAATTTATAAAGGGAGTGAGCACATGCCTGAAGAATGCAAGGGGCATTTGGTTAGAAAGTTTATAAAGGAATGTTGGAGGAAATGTGGATGTGATATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTTTAAGATGTAAACTGCAGGTATTCTTGACTCAGGAAGGAAAGGGTTGGGGCATTAGAACACTAGAAGATTTGCCCAAAGGTTGCTTTGTATGTGAGTACGTCGGGGAAATATTAACCAATGCAGAATTGTATGAAAGGGTATTGCACAAAAGCAGCAAGGACAGACATACATATCCTGTAACCCTTGATGCAGATTGGGGCTCAGAAAGGGTGTTAAAGGATGATGAGGCACTCTGCTTAGATGCAACTTATAATGGAAATATTGCAAGGTTTATCAATCATAGATGCTTTGATGCAAATTTGATAGACATTCCTGTTGAAGTGGAGATTCCTGATCGCCACTATTATCATATTGCTCTCTTTACTAATAGGAAAGTGAAAGCATACAAAGAGCTGACATGGGATTATGGTATTGACTTTGATGATCAGGAACATCCTATTAAAGCATTTCAATGCTGCTGTGGAAGTACCTTCTGCCGTGACAAGAAAAAGAAAGGAACTGGCATGAAAGCTAAAAAACAAAGGTAG 2022 0.3709 MAPNRRVTNAYNAMRILGISDDEVMPVLKRLLKVYGNSWELIEEDNYQTLIHAYFESMEYQQEKGKGKAPISNHDGERARLKLQMISVVDNEILSKTSKKKIIKPSQASKEDMKLANSSQPLQTRLSEVEIISSLSCMDARDSKKLCHENAASARDCGDSFDGSSRSHIQKIHMSSNRYEKELIILKAKKPKLHLEPVSSHLKGPCDDSNVNHRFKFISALYQNGPNPNHANLSNMVQQAIVHPEYNSAGPCDDSNTNRHFKSISSLYQNGPNLNHANLTNMVQQAVVHPEHNSRGPCDDSNVNCRFKSISTLYQYGPNLNHANLTKIAQKAIVHAENSSIQILSDITKGSEKVAISLLDETGSEELPKFNYIPNNIIYQNANVNISLARVADEDCCSDCSGNCLSLTFPCACSQETGGEFAYTREGLVKEKFLEACIATKIKPQPYHFVYCQECPIYKGSEHMPEECKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLRCKLQVFLTQEGKGWGIRTLEDLPKGCFVCEYVGEILTNAELYERVLHKSSKDRHTYPVTLDADWGSERVLKDDEALCLDATYNGNIARFINHRCFDANLIDIPVEVEIPDRHYYHIALFTNRKVKAYKELTWDYGIDFDDQEHPIKAFQCCCGSTFCRDKKKKGTGMKAKKQR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01952 673 Gene3D SET domain 322 647 IPR046341 -
Arst9g01952 673 Pfam SET domain 513 635 IPR001214 GO:0005515
Arst9g01952 673 SUPERFAMILY SET domain 356 658 IPR046341 -
Arst9g01952 673 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 670 - -
Arst9g01952 673 CDD SET_SETDB-like 368 635 - -
Arst9g01952 673 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 673 IPR025776 -
Arst9g01952 673 ProSiteProfiles Pre-SET domain profile. 400 498 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst9g01952 673 Gene3D - 1 59 IPR043017 -
Arst9g01952 673 SMART set_7 501 641 IPR001214 GO:0005515
Arst9g01952 673 ProSiteProfiles SET domain profile. 501 635 IPR001214 GO:0005515
Arst9g01952 673 Pfam Pre-SET motif 347 493 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst9g01952 673 FunFam SET-domain containing protein lysine methyltransferase family protein 347 660 - -
Arst9g01952 673 SMART preset_2 344 485 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst9g01952 673 Pfam Ubiquitin-binding WIYLD domain 4 59 IPR018848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01952 Arst-Chr9 52192365 52203885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01952 477 658 C2H2 Transcription Factor Family AT2G23740 39.572 4.25e-29 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst9g01952 Pre-SET 2.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01952 - - aip:107615621 867.84