Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01903 ATGAAGGCTGAGCTTAAGGAGAAGCTTGCTAGAATCTATGATGTTAAGGACCCCAACACCGTGTTTGTGTTCAAGTTCCGCACCCATTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGACACTGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGACTTATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCAAGGAAGCAAATGAAGGAAAGAAAGAATAGGGCAAAGAAGATCCGTGGAGTAAAAAAGACCAAGGCTTCTGATGCTGCCAAGGCTGGAAAGAAGAAATGA 306 0.415 MKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDAAKAGKKK 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01903 101 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 2 72 IPR012678 GO:0003735|GO:0005840|GO:0006412
Arst9g01903 101 Gene3D - 1 96 - -
Arst9g01903 101 PANTHER 40S RIBOSOMAL PROTEIN S24 2 95 IPR001976 GO:0003735|GO:0005840|GO:0006412
Arst9g01903 101 MobiDBLite consensus disorder prediction 66 101 - -
Arst9g01903 101 ProSitePatterns Ribosomal protein S24e signature. 30 52 IPR018098 -
Arst9g01903 101 Pfam Ribosomal protein S24e 2 67 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01903 Arst-Chr9 45493485 45494861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01903 2 96 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.316 4.22e-57 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01903 K02974 - gmx:100499852 171.4