Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01882 ATGGCTGGTAACAATAATAACGGGTCGGAAGGTTTGGGCGACGATTTCTTCGAACAGATCTTGGCGGTTCCAAGTGAGTATGGCGGCGGTGGCGGTAGAACATTAGTGGGGTCCATGCCAATGGTGCTTCAGTTGGGGTCCACAGTATCAAGGACTACTGTTCCGGATGGCTTAAGAATGGGGATGCCTTTGGGTTTGAATTTGGAGCAAACTGGTTTCCTTAGACGCTTTCCTGAACAAGTTTCTGATGTTGAGGCTGCCATTAACAACAACCACCACCACCAACAACAATACCTTCGTCTTAGTAACAATACCAACAACAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGCTCTCCATCTTCCTCTTCTACTGCTGGAATCACTACTGATCGGGATTCGATGCACATGAGAGGTTTGTTTCCAGCGTTTGGACAGTTGCAAAATACTCCCCCCCTTCCTCCTCCTACTCAGCCACCTCTTCGCCCCACTCTTCCATCTCCTCTCCACCACCACCAGGCATTTCAGAGGCAGCAAGCCCCAAATCCAGTGTCTGTAACTGCTCTGCCACAACAACCACCGGGGATACGCCCTCGAGTGCGAGCAAGAAGAGGCCAAGCTACCGATCCTCACAGTATTGCTGAGAGGTTACGTCGTGAGAGGATTGCTGAAAGAATGAAGGCATTGCAGGAATTAGTTCCCAGCATCAATAAGACGGACAGAGCAGCCATGCTTGATGAAATTGTGGATTATGTCAAGTTTCTAAGGCTCCAAGTTAAGGTATTGAGCATGAGTAGACTAGGTGGGGCTGGCGCTGTTGCCCAGCTTGTGGCTGATGTTCCTCTATCTGCTGTCGAGCAGGGTGAGGAAATAGAAGGTGGAGGGAACAACGAGCAAGCATGGGAGAAATGGTCAAATGATGGAACAGAGCAACAAGTTGCAAAGTTAATGGAAGAAGATGTTGGAGCTGCCATGCAATTCCTTCAGTCCAAGGCACTTTGCATTATGCCTATTTCTCTTGCCTCAGCCATTTTCCGTATGCCTCCTTCAGAACCATCATCACTCATCAAGCCTGAATCTAACTCCCATTCATAG 1113 0.4681 MAGNNNNGSEGLGDDFFEQILAVPSEYGGGGGRTLVGSMPMVLQLGSTVSRTTVPDGLRMGMPLGLNLEQTGFLRRFPEQVSDVEAAINNNHHHQQQYLRLSNNTNNNNNNNNNNNNNNNNNNSSPSSSSTAGITTDRDSMHMRGLFPAFGQLQNTPPLPPPTQPPLRPTLPSPLHHHQAFQRQQAPNPVSVTALPQQPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEQGEEIEGGGNNEQAWEKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPPSEPSSLIKPESNSHS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01882 370 SMART finulus 218 267 IPR011598 GO:0046983
Arst9g01882 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 261 IPR011598 GO:0046983
Arst9g01882 370 MobiDBLite consensus disorder prediction 102 136 - -
Arst9g01882 370 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 92 348 - -
Arst9g01882 370 Gene3D - 207 269 IPR036638 GO:0046983
Arst9g01882 370 FunFam Basic helix-loop-helix transcription factor 207 269 - -
Arst9g01882 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 271 IPR036638 GO:0046983
Arst9g01882 370 MobiDBLite consensus disorder prediction 154 172 - -
Arst9g01882 370 MobiDBLite consensus disorder prediction 150 216 - -
Arst9g01882 370 Pfam Helix-loop-helix DNA-binding domain 217 261 IPR011598 GO:0046983
Arst9g01882 370 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01882 Arst-Chr9 43726105 43743167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01882 174 367 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 72.165 1.08e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g01882 HLH 3.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01882 - - lang:109355094 395.586