Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01878 ATGGCCTTCCTGCAGCTCGAGAGGTCCAACCAATCAAACGTATTGGAGGCAAGAGCTGGGTATTATGAAAAGCCAATTGCTACAATAGATTTTGCATCACTATATCCATCTATTATGATGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAATGGATAACTTGAACGCTTAA 276 0.3949 MAFLQLERSNQSNVLEARAGYYEKPIATIDFASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPESVNKTPSGETFVKSNLQKASIGMDNLNA 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01878 91 SUPERFAMILY DNA/RNA polymerases 14 77 IPR043502 -
Arst9g01878 91 Gene3D Palm domain of DNA polymerase 14 89 IPR023211 -
Arst9g01878 91 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 11 81 - -
Arst9g01878 91 Pfam DNA polymerase family B 12 82 IPR006134 GO:0000166|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01878 Arst-Chr9 43050864 43054054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01878 12 82 Core DNA Replication Machinery Family AT5G63960 85.915 5.36e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01878 K02327 - adu:107465568 184.496