Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01871 ATGACCGATATACCCCTGTGGGATCTTTCTCTCTCGCCTTCGCAGAAACAGAAACGAAAACACCAACGAACAATACTCGCACACAGAAACCAATCCCAAAACTTAAAAGGACAGAGACAAAACATCGTGATCACCAATAGCATTTGGATTTCCATGGATAGGGTCTTCTCAGTGGACGAAATCCCTGACCACTTCTGGTCCTCCATCCCCTACGACACCAACCACCACCCGCCTCCTTCCAACTCCAACTCCCACATCAACCGCAGCCCTTCCGAGTGGGCCTTCCAGCGCTTCCTCCAAGAAGCTGCTCCTCCCTCTCCCCCTCACCGAAACGACGCCGTTTTCTTCATCCACGACGACGATCACACTCATCCCCACGTCACCAAGCCCGATCCGAACGACACCCTTCCTGTTCCTAAGAACGACGCCGTTTTGACCAATGCCTCTCCTCCTCCCCCTCCTCCTCCTCCTCCTTCGAAAACAGCGGCTTCATCTTCCCTTGGCGTTGATTCCGATGACTACCAGGCTCTCCTTAAGAACAAGCTCAATCTTGCATGTGCCGCTGTCGCCATGACTAGGGCAGCATCTTTATCCAAGTCTCAAGATCCAGCCACTTTTGCTGATAGTGGATCGTCTAATATCTCTCAAGTTGGACCTCAGCCTTCTATAAAAGGATCTGGTACTTCTGGAAATGACCCACCTAAAATACAAGACAAAGATGCCAAAGCACCAATCGGGATACCTTCCATACCTGTCATACAAAAGAAACCCGCTGTTACAGCCAGGCCATCAACAAGTGGATCATCAAGGGAACAGTCAGATGATGAGGAAGCTGAAGGAGAGACAGATCTGAATGACAACATGGACCCTGCTGATGTAAAACGAGTAAGAAGGATGCTTTCAAATAGAGAGTCAGCCAGACGTTCAAGAAGAAGAAAACAAGCTCATTTAAACGAGCTGGAGACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGCTAAAGCGCCTTACTGATGTAAGCCACAAGTACAATGAATCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTTGAAACCTTAAGAGCAAAGGTGAAGATGGCGGAAGAAACCGTCAAAAGAATTACAGGGTTGAACCCAGTAATGCATGCCATGTCTGATTTAACATCAATGGGCATACCGACATTTGACGGAAGCCCTCCTGACACATCAGCTGATGCATCTGTCCCCGTGAGAGATGATACTCACCATCACCACCACTTCTTTCAACAAACATCAGGGTTTGAACGTCTTTTCTCTTTGTGTTGTCTTGGAGGGAGGCTGCTGCCGCGGCTAATCAGATCAGAAGAGGATTCAATTTTAAGCAGCGAGGAAGAACGGATTTTTCAACATGTTGCATCACTTTTAGTGCTGAGTTAG 1422 0.4754 MTDIPLWDLSLSPSQKQKRKHQRTILAHRNQSQNLKGQRQNIVITNSIWISMDRVFSVDEIPDHFWSSIPYDTNHHPPPSNSNSHINRSPSEWAFQRFLQEAAPPSPPHRNDAVFFIHDDDHTHPHVTKPDPNDTLPVPKNDAVLTNASPPPPPPPPPSKTAASSSLGVDSDDYQALLKNKLNLACAAVAMTRAASLSKSQDPATFADSGSSNISQVGPQPSIKGSGTSGNDPPKIQDKDAKAPIGIPSIPVIQKKPAVTARPSTSGSSREQSDDEEAEGETDLNDNMDPADVKRVRRMLSNRESARRSRRRKQAHLNELETQVSQLRGENSTLLKRLTDVSHKYNESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPVMHAMSDLTSMGIPTFDGSPPDTSADASVPVRDDTHHHHHFFQQTSGFERLFSLCCLGGRLLPRLIRSEEDSILSSEEERIFQHVASLLVLS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01871 473 FunFam BZIP transcription factor 292 343 - -
Arst9g01871 473 Gene3D - 293 350 - -
Arst9g01871 473 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 297 312 IPR004827 GO:0003700|GO:0006355
Arst9g01871 473 PANTHER BASIC LEUCINE ZIPPER 63 52 426 - -
Arst9g01871 473 SUPERFAMILY Leucine zipper domain 294 344 IPR046347 GO:0003700|GO:0006355
Arst9g01871 473 MobiDBLite consensus disorder prediction 197 233 - -
Arst9g01871 473 MobiDBLite consensus disorder prediction 121 167 - -
Arst9g01871 473 Coils Coil 303 337 - -
Arst9g01871 473 SMART brlzneu 290 354 IPR004827 GO:0003700|GO:0006355
Arst9g01871 473 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 292 347 IPR004827 GO:0003700|GO:0006355
Arst9g01871 473 Pfam Basic leucine-zipper C terminal 361 421 IPR020983 -
Arst9g01871 473 MobiDBLite consensus disorder prediction 146 161 - -
Arst9g01871 473 Coils Coil 352 372 - -
Arst9g01871 473 MobiDBLite consensus disorder prediction 197 293 - -
Arst9g01871 473 CDD bZIP_plant_GBF1 295 346 IPR045314 GO:0003700|GO:0006355
Arst9g01871 473 Pfam bZIP transcription factor 293 345 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01871 Arst-Chr9 42723694 42728924 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01871 52 387 bZIP Transcription Factor Family AT4G02640 39.650 2.52e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst9g01871 bZIP_C 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01871 K25784 - gmx:100170702 425.246