Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01813 ATGAGGTGGCGTAGCTGCCTCCGAAGTCCGAAGCTGAAGCACTGCAACTGCGCATCTCGGCAACTATTCGCCACTGGTCCTGTACTCTGCCGCCTTCATATTAGCTCAAATCCAAATCCAAATCCAATGGCTTCGGAGAAGAAACTTGCGAATCCAATGAGAGAGATCAAGGTGCAGAAGCTCGTTCTCAACATCTCCGTGGGTGAGAGTGGAGATCGTCTCACTAGAGCCGCTAAGGTGCTAGAGCAACTTAGTGGCCAAACCCCAGTGTTTTCCAAAGCAAGATACACTGTCCGTTCCTTTGGAATTAGAAGGAATGAGAAGATTGCATGCTATGTCACTGTTCGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTTTGAAGGTTAAAGAATACGAACTTTTGAGAAGAAACTTTTCTGAGACTGGCTGCTTTGGCTTTGGTATTCAGGAGCATATCGATTTGGGAATCAAGTATGATCCTTCCACTGGTATCTATGGTATGGACTTCTTCGTTGTTTTGGAGCGACCAGGATACCGAGTTGGAAGGCGCAGGAGACAGAAGTCCCGTGTTGGAATTCAGCACAGGGTTACCAAAGAGGACGCCATGAAATGGTTCCAAGTGAAGTATGAGGGAGTTATTCTGAACAAGTCCCAACAAATCTCTTAA 672 0.4688 MRWRSCLRSPKLKHCNCASRQLFATGPVLCRLHISSNPNPNPMASEKKLANPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRQKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQQIS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01813 223 SUPERFAMILY RL5-like 51 215 IPR022803 -
Arst9g01813 223 Gene3D - 43 219 IPR022803 -
Arst9g01813 223 ProSitePatterns Ribosomal protein L5 signature. 81 97 IPR020929 GO:0003735|GO:0005840|GO:0006412
Arst9g01813 223 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 42 218 IPR002132 GO:0003735|GO:0005840|GO:0006412
Arst9g01813 223 Pfam Ribosomal protein L5 51 104 IPR031310 -
Arst9g01813 223 FunFam 60S ribosomal protein L11 44 216 - -
Arst9g01813 223 Pfam ribosomal L5P family C-terminus 108 206 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01813 Arst-Chr9 38720199 38722605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01813 43 223 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 93.370 9.42e-126 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01813 K02868 - msin:131221497 330.102