Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01801 ATGGGGCCCTCTTATACCATGAAGAACCAGCTGACTCTCATGAGCAATATTGATCTCCTCAGCCGACATAAAGATGCAACTGCGTCGGCACACAATTTGAGGGAATTGGAGATGGAGAAAGAGAAAGAAGATGAGACATCTCCAAGGGGTGTCTTAGAAGCTGAGTCAGAGCAACAAGCATCTGAATCAAATGCAAGTGGTTCAAGTAGTTCAAGCAGAGCACGCTCTCGATGGGGCAAAATTTTCAAATTGTGGAAAATTAGACCAACTAAGAATCACCTACCTTCATTACACACTCTTAGTTTCTCCAAGTTACGATGGAAGAGCAAAAGCACTAAAGAAGATACTACTACTACTCTACATACTGGTTTCTACAACTTCAGGTCTTCTTTGATCACTTTTAGCCTTTCAGAATTACAATATGCAACCAACAATTTTAGCAGCGAAAATTTAATAGGAAGAGGTGGTTTTGCTGAGGTTTATCAGGGTTGTCTTGAAGAAGGGAAACTAATAGCAGTGAAGAAATTGACGAATGGAAGCTTAGAAGAAAAGACAGCAGATTTTCTATCAGAACTTGGCGTGATTGCCCATGTTGATCATCCTAATACTGCCAAGATTATTGGATGCTGTGTCGAACGAGACATGCATCTTCTTGTCTTTTCACTTTCTCCTCTCGGAAGTTTGGGATCTCTTATTCATGGTCCAAATAAACACAAACTAGATTGGAGTAAAAGATACAAGATTGCTTTGGGAATAGCTGATGGTTTACTCTATCTACATGAGAATTGTCACAGACGGATTATTCATAGAGATATTAAAGCAGAGAATATTTTGCTCACCGAGAATTTTGACCCACAGATTTGTGATTTCGGGCTCGCAAAATGGTTACCAGAACAGTGGACTCACTGCAACGTAACGAAAATTGGAGGCACATTTGGGTATTTTGCACCTGAATATTGCATGCATGGCATAGTAGATGAGAAAACTGATATATTTTCTTTTGGGGTCTTACTTCTGGAGATCATAAGTGGGCGTCCAGCTTTGGATGATATGCAGAAAAGCCTTGTGCTGTGGGCCAAACCTTTGCTTGAAGCTAAGAATATTGAAGCACTTGTTGATCCTTCTCTTGATGATGATTATGATAAGGACCAAGTAGGTCATGTTGTTTTCACTGCATCAAAGTGTGTTGATCAGTCTCCTATTTTAAGGCCTTGCATGAGTGAGGTTGTGACACTACTAAGAGGTCATGATAAGTGTGACTTAGAATCAAGAAAAGGTCAAAGAAAGTCGCTTCAGAGAACATACTCAGAAGAGCTACTAGATGCACAAGAATACAACTCAACAAAATATCTTAGAGATCTCAATCGACATAGACAACTTGCCTTGGGTTCTTGTGAATCTTGA 1404 0.3989 MGPSYTMKNQLTLMSNIDLLSRHKDATASAHNLRELEMEKEKEDETSPRGVLEAESEQQASESNASGSSSSSRARSRWGKIFKLWKIRPTKNHLPSLHTLSFSKLRWKSKSTKEDTTTTLHTGFYNFRSSLITFSLSELQYATNNFSSENLIGRGGFAEVYQGCLEEGKLIAVKKLTNGSLEEKTADFLSELGVIAHVDHPNTAKIIGCCVERDMHLLVFSLSPLGSLGSLIHGPNKHKLDWSKRYKIALGIADGLLYLHENCHRRIIHRDIKAENILLTENFDPQICDFGLAKWLPEQWTHCNVTKIGGTFGYFAPEYCMHGIVDEKTDIFSFGVLLLEIISGRPALDDMQKSLVLWAKPLLEAKNIEALVDPSLDDDYDKDQVGHVVFTASKCVDQSPILRPCMSEVVTLLRGHDKCDLESRKGQRKSLQRTYSEELLDAQEYNSTKYLRDLNRHRQLALGSCES 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01801 467 SUPERFAMILY Protein kinase-like (PK-like) 126 413 IPR011009 -
Arst9g01801 467 Gene3D Transferase(Phosphotransferase) domain 1 224 439 - -
Arst9g01801 467 FunFam Somatic embryogenesis receptor kinase 1 112 222 - -
Arst9g01801 467 Gene3D Phosphorylase Kinase; domain 1 106 221 - -
Arst9g01801 467 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 224 427 - -
Arst9g01801 467 MobiDBLite consensus disorder prediction 30 73 - -
Arst9g01801 467 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Arst9g01801 467 MobiDBLite consensus disorder prediction 52 73 - -
Arst9g01801 467 Pfam Protein tyrosine and serine/threonine kinase 149 358 IPR001245 GO:0004672|GO:0006468
Arst9g01801 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Arst9g01801 467 MobiDBLite consensus disorder prediction 30 51 - -
Arst9g01801 467 PANTHER OS08G0249100 PROTEIN 31 457 IPR046958 -
Arst9g01801 467 SMART serkin_6 146 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01801 467 ProSiteProfiles Protein kinase domain profile. 146 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01801 Arst-Chr9 38050312 38083977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01801 100 422 Receptor kinase-like Gene Family AT1G53420 41.641 3.38e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Arst9g01801 PK_Tyr_Ser-Thr 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01801 - - aip:107615479 801.971