Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01776 ATGACCTCCGTTTTGCATAACTGTCCAAATGACAGAATTATCCTTCTCTCCTCCTTTCTCTTTCACCTCCTTCTCTTCTTTCCCTTCATCGGAGCACAATCCGATAACAACAACCAAAACAACTCTTACTACAACCGTTTCAGCCCTTCCATGGCGATAATAGTTGTAATCCTCGTCTCCGCACTCTTCCTCATGGGATTCTTCTCCATCTACATCCGCCACTGCTCCGACTCTCCTTCCGTCAGCATCCGCCACCTTGTCGCCACCGGCAGATCCCGCCGCGGTCCACGAGGTCTCGACCCTGCCGTCATCCACTCGTTCCCAACCTTAGAATACTCAGTCGTAAAAATCCACAAGATTGGAAAGGGAGCACTCGAATGCGCAGTGTGCCTCAACGAGTTTGAAGACACTGAAACGCTGCGTTTGATTCCCAAATGCGACCACGTATTCCACCCTGAGTGTATCGACGAGTGGCTCGAGTCTCACACCACGTGTCCAGTTTGCAGAGCCGACCTCCTCCCACAACCGGGAGACTCCGTACGCGGCGCCGCCGCCGTCGTGATTTCAGAGTTGGCAAACGACCAGTTGTCCTCGCCGCGCAATTTGGAATCGCGGAACCAAAGCGACGTCGTAGTTGCTGTGGAGCAAGAAAGTGATGAGAATCTGGAGAATAATAAGAATGAAAGGGTAAGTGTTGATGATCGGGAAGTATTGTGTTTGAATATGAACCAGGCGTTGAATTTGAACCGCACGAGGGGTTCCCGGTCGGGGAGGCCGAGGAGGTTTCCGAGAGTGAGGAAGAAGATTCTAGAACCTCAGTTGAACCGAGCGAGGAGCTTGGTTATTTTGCCGAGAGAAGGGAGCTCAAAGAGGGGTTACCGAACTGGGGGCGGAGAAGGAAGTAGTAGGGGCCGGTCTACAAGGCGGTTAGACCGGGTTTTTAAGTCGGACCGGTGGATTTTCACTATGGCGCCACCGTTTCTCGTTAGGGCGTCGTCAATTAAGTCACCACGGGTGGCTAATAGCGCCGCCGGCGGAAGTTCATCGGCTGCTCCAGCAGCTGCACCACCAGTTCTGACTGCCCCATCAGCAACATCAGAAATACACCATTTACCGGTTTAA 1122 0.5267 MTSVLHNCPNDRIILLSSFLFHLLLFFPFIGAQSDNNNQNNSYYNRFSPSMAIIVVILVSALFLMGFFSIYIRHCSDSPSVSIRHLVATGRSRRGPRGLDPAVIHSFPTLEYSVVKIHKIGKGALECAVCLNEFEDTETLRLIPKCDHVFHPECIDEWLESHTTCPVCRADLLPQPGDSVRGAAAVVISELANDQLSSPRNLESRNQSDVVVAVEQESDENLENNKNERVSVDDREVLCLNMNQALNLNRTRGSRSGRPRRFPRSHSTGHSLVQPGEDTERFTLRLPLDVRKKILEPQLNRARSLVILPREGSSKRGYRTGGGEGSSRGRSTRRLDRVFKSDRWIFTMAPPFLVRASSIKSPRVANSAAGGSSSAAPAAAPPVLTAPSATSEIHHLPV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01776 398 CDD RING-H2_EL5-like 126 169 - -
Arst9g01776 398 SMART ring_2 127 168 IPR001841 -
Arst9g01776 398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 174 IPR013083 -
Arst9g01776 398 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
Arst9g01776 398 Pfam Ring finger domain 126 169 IPR001841 -
Arst9g01776 398 PANTHER RING FINGER DOMAIN-CONTAINING 39 179 - -
Arst9g01776 398 SUPERFAMILY RING/U-box 122 176 - -
Arst9g01776 398 MobiDBLite consensus disorder prediction 313 334 - -
Arst9g01776 398 MobiDBLite consensus disorder prediction 364 398 - -
Arst9g01776 398 FunFam E3 ubiquitin-protein ligase ATL6 87 175 - -
Arst9g01776 398 MobiDBLite consensus disorder prediction 250 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01776 Arst-Chr9 35948500 35950061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01776 19 381 Rapid Response to Elicitors AT3G05200 44.267 2.11e-84 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01776 K10664 - gmx:100810865 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01776 9 35948500 35950061 Arst9g01776 9 35948500 35950061 ECH
Arst9g01776 9 35948500 35950061 Arst9g01776 9 35948500 35950061 PCT