Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01757 ATGGATCCTCACCAAGGTCATAACCAAAACCCATCCATGGGAGTTGGTGGCAGCGGAGCACAATTCCCCTATGGTTCCAATCCATACCAGCCCAACCAAATGACTAGCTCACCTGGGATGGTTGTTCCACCAATTGGGACCATTCAATCCACTGGTCAGCCTGCTACAGCTCAATTGGGCCAACATCAACTGGCTTATCAACATATTCATCAACAACAACAGCAGCAACAGCAGATGCAACTTCAGCAACAACTTCAGTCCTTTTGGGCTAACCAATACCAAGAAATTGAGAAGGTAACTGATTTCAAGAACCACAGCCTTCCCCTGGCAAGGATCAAGAAGATCATGAAGGCTGATGAGGATGTCAGGATGATATCGGCCGAAGCGCCGGTCATATTTGCGAGGGCATGCGAAATGTTCATACTGGAGTTGACATTGCGATCATGGAATCACACTGAAGAGAACAAGAGGAGGACTCTTCAAAAGAATGACATTGCTGCTGCAATTACAAGAACCGATATCTTCGATTTCTTGGTTGACATTGTGCCCAGGGAGGATCTGAAAGATGAAGTGCTTACGTCAGTGCCAGGAGGAACAATGGCTGTTCCAGGGCCAGCTGATTCTATTCCTTACTGCTATATGCCGCCACAGCATGCACAAGTTGGAGCTGCAGGAGTCATGATGGGTAATCCTGCAATGGACCCCAATTTATATGCTCAGCAGCCTCATCCCTACATCGCACCGCAAATGTGGCCACAGCCACCAGAGCAACAACAGTCGCCTTCGGATCATTGA 795 0.4818 MDPHQGHNQNPSMGVGGSGAQFPYGSNPYQPNQMTSSPGMVVPPIGTIQSTGQPATAQLGQHQLAYQHIHQQQQQQQQMQLQQQLQSFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSVPGGTMAVPGPADSIPYCYMPPQHAQVGAAGVMMGNPAMDPNLYAQQPHPYIAPQMWPQPPEQQQSPSDH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01757 264 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 73 207 - -
Arst9g01757 264 MobiDBLite consensus disorder prediction 23 39 - -
Arst9g01757 264 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 106 169 IPR003958 -
Arst9g01757 264 FunFam Nuclear transcription factor Y subunit gamma 69 184 - -
Arst9g01757 264 MobiDBLite consensus disorder prediction 1 16 - -
Arst9g01757 264 Gene3D Histone, subunit A 66 184 IPR009072 GO:0046982
Arst9g01757 264 MobiDBLite consensus disorder prediction 1 39 - -
Arst9g01757 264 SUPERFAMILY Histone-fold 76 178 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01757 Arst-Chr9 34968519 34970906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01757 17 263 CCAAT-HAP5 Transcription Factor Family AT1G54830 61.134 1.24e-88 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Arst9g01757 CBFD_NFYB_HMF 5.9e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01757 K08066 - gmx:100527803 380.948