Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01710 ATGTGTATTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCTCAGCAAGTTCTCCGTCATGTCAATGTCTCTCTCCATGACGGAAGTGCGCTCGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCCGCATGCTAGCTGGATTTTCCCGTCCCTCAGCTGGTGAAATTCTTTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCCAGCTCAACTGGCTCTCCCTCAAGGATGCGATCACTGATCGGTTCACGGTTCTCGAAAATGTTCAGTGGTTTGAGGTTCTTGAAGGAAAGTCTGGCAGGGCTTTACCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAGCCAAGGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAAGGTTGATTGCTCTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATTTCGGAACATCGGAAAAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGGTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACTTTCTTTGATATGCTTGATCGTTCGGATATTATGTAA 690 0.4797 MCIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLQLNWLSLKDAITDRFTVLENVQWFEVLEGKSGRALPALELMGLGRLAKEKPRMLSMGQRKRVQLARLIALDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMVLRLPPRFPRRMTFFDMLDRSDIM 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01710 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Arst9g01710 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 229 IPR003439 GO:0005524
Arst9g01710 229 SMART AAA_5 35 223 IPR003593 GO:0016887
Arst9g01710 229 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 208 IPR005895 GO:0017004|GO:0022857
Arst9g01710 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 222 IPR005895 GO:0017004|GO:0022857
Arst9g01710 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 201 IPR027417 -
Arst9g01710 229 Gene3D - 8 208 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01710 Arst-Chr9 33197898 33200518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01710 24 207 Calmodulin-binding Proteins AT2G36910 25.000 2.42e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01710 - - cpap:110815669 404.445