Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01696 ATGGCGGATTTTCTGACCTCTACCCACCGTGCCAAGTGGATCTTCACTCCTCAACAGTTGGTTGAAAAATATAGAGATGCTAGTCAGAGAGCCATACAAACTTTAGAGAAGTGTGGAGCAACTCTGATGGAAGTAGATAGTGATGGGACAATGTCATATCCTGAACCTCAGAATTCTGTGAAGGATAATGCTGAAAAGCATTCTCGGTCAAAACCTCTCAGTATTGAAGAAGAACAATCTATAAAAGTGTTTTATGAAAACAAGCTACAAGAAGTTTGTAAAAATTTCCACTTCCCTCATAAGATCCAGGCAACGGCCCTTATCTATTTTAAAAGGTTCTACCTGCACTGGTCAGTAATGGAACATCAGCCAAAACATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAACCATGTCTCTGCTGAGGAGCTTGGTAAAGGGATCTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTTTATGCACCATATCGTTCACTTGAAGGTTTTATGGATGATATGGAGGACTTTTGCAATGCTAGCGAGGACCAGCTTCAAATGTTGAAGAGATTACAAGACACAGCTAGATTGGAAATTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGCGCAGTTGGCTTTAGCTGCTTTGCGCAGTTCAGTTGCACTCCATCAAGTTATTGACTTTGACAGTTATCTGAGCAGTTTATTTTCTCGTCAAAACTCCACACATACAATGTCCGAGCTTATTGAAGCACTTAACACAATTGATTCTTTGGTTATGAAATACAAATTTCCTTCAGATAAAGAATTGAAACATATCAATAGGAAACTGAAGTCTTGTTGGGGTCAAAGCTCTCATGACGAGGGAAAGAAGCGAGAGAAGAAATCAAAGCACAAGTCGAAAAAGAGCTCGAGTGAAGCACACAATGCGCCGCCTCCTGCCTAG 1008 0.3948 MADFLTSTHRAKWIFTPQQLVEKYRDASQRAIQTLEKCGATLMEVDSDGTMSYPEPQNSVKDNAEKHSRSKPLSIEEEQSIKVFYENKLQEVCKNFHFPHKIQATALIYFKRFYLHWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSLEGFMDDMEDFCNASEDQLQMLKRLQDTARLEIDKMMLTDAPLLFPPAQLALAALRSSVALHQVIDFDSYLSSLFSRQNSTHTMSELIEALNTIDSLVMKYKFPSDKELKHINRKLKSCWGQSSHDEGKKREKKSKHKSKKSSSEAHNAPPPA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01696 335 PANTHER CYCLIN 62 326 IPR043198 GO:0006357|GO:0016538
Arst9g01696 335 MobiDBLite consensus disorder prediction 302 335 - -
Arst9g01696 335 FunFam cyclin-H1-1 63 175 - -
Arst9g01696 335 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Arst9g01696 335 MobiDBLite consensus disorder prediction 49 72 - -
Arst9g01696 335 Pfam Cyclin C-terminal domain 179 279 IPR031658 -
Arst9g01696 335 FunFam Cyclin h 177 282 - -
Arst9g01696 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Arst9g01696 335 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
Arst9g01696 335 CDD CYCLIN_AcCycH_rpt2 177 301 - -
Arst9g01696 335 Gene3D - 63 175 - -
Arst9g01696 335 Gene3D - 177 282 - -
Arst9g01696 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Arst9g01696 335 SMART cyclin_7 87 168 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01696 Arst-Chr9 32945702 32952991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01696 1 281 Core Cell Cycle Gene Families AT5G27620 62.633 2.15e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01696 K06634 - gmx:547736 518.85