Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01690 ATGGAGAGTAACAGTAGAAGTAGTAGTAATAATGAGGATATGAGTTTGCCGATTGCAAATGTGGGAAGAATAATGAAGCAAGTGGTGCCAGGAAGTGGAAAGATCTCAAAAGAAGGGAAGCAGTTAATGCAAGAGTGCGTGACAGAGTTCATAAGCTTTGTGACGGGTGAGGCCTCTGCCAAGTGTCACAAGGAGAATCGAAAGACCGTTAACGGCGACGACATCTGCTGGGCGCTTTCTTCCTTAGGGTTTGACAACTACGCCGAGGCCATCTCCAGGTACTTGTATAAATACCGCCTTGCTCACACTCACAGGGAACAAAACCTTCTTTCCAACAATAACAACAACAAAGAACATTCTAGAGTTTAG 369 0.4472 MESNSRSSSNNEDMSLPIANVGRIMKQVVPGSGKISKEGKQLMQECVTEFISFVTGEASAKCHKENRKTVNGDDICWALSSLGFDNYAEAISRYLYKYRLAHTHREQNLLSNNNNNKEHSRV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01690 122 PRINTS CCAAT-binding transcription factor subunit A signature 43 61 - -
Arst9g01690 122 PRINTS CCAAT-binding transcription factor subunit A signature 62 80 - -
Arst9g01690 122 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
Arst9g01690 122 SUPERFAMILY Histone-fold 12 111 IPR009072 GO:0046982
Arst9g01690 122 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Arst9g01690 122 Gene3D Histone, subunit A 3 121 IPR009072 GO:0046982
Arst9g01690 122 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 111 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01690 Arst-Chr9 32824664 32825305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01690 11 120 CCAAT-HAP3 Transcription Factor Family AT1G09030 64.865 8.41e-50 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Arst9g01690 CBFD_NFYB_HMF 1.2e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01690 K08065 - gmx:100815151 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01690 9 32824664 32825305 Arst9g01690 9 32824664 32825305 ECH