LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst9g01687	ATGGAGGGGACCGAGGAGGTTTCATCTAATTTTCAGGAGAATGTCACTTCAGGGGTGGAAGAGGACCCGATAGAAAATGAGACCTTTGTTGCAGAAACAAAATCCGTTCCGATTGGTGCTAGTCAATCAGACGATCAAAGAGATGTCATCGTTCTCGACGGAATAGACTTCTATAACGAGTACGGTCGAATTAAGGGGTTTTCCATACGGCGGTTGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAGGGCGACATTATATGGCAAATTTTTGTATGCTCGCGACAAGGTGAACGAGATGCAAAGCATGTTCACAGAAATGATAGGAAGATGGATCCTAGACAAGTAACGCGATGCGGGTGTAATGCGCGGATAAAAGTTCATGTTCACTCGAGGAACGGGAGATGGTATGTTGACTTCTTCTCCGATGAACATAACCATGACATGTTAGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAATGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTTCGACAATATTTCGGGCTTTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGCAATTGAGAAGCAAAAAAGAGCTGGAGCAAGTGACACGGATAATGCACTCAAGTATTTACAAATGTTGAAGAGGCGTGACCCCTGTATATTTTGGAAGTATTCGTTGGATGAACAATGGAGGCTTCACAATATATTTTGGTGTGATGGCGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATACAACATACTGGAGGAATAAGTACAAATGTCCCCTTGTGATATTCTCTGGCATGGATCACCACATGCGCACTGTTGTGTTTGGATGCGCAGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTCCTTTGGGCATTTTTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACGGTGATCAAGCCATGAAGAGTGCAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACGCAATGCGACCACTCGAGTAGGTATTCCACGGTTTATGACCAAGTTTCGTCTTTGTTTAATAGGGGATTTGGAGGTCGATGACTGA	1173	0.4467	MEGTEEVSSNFQENVTSGVEEDPIENETFVAETKSVPIGASQSDDQRDVIVLDGIDFYNEYGRIKGFSIRRLKVGRCKKAGSEGDIIWQIFVCSRQGERDAKHVHRNDRKMDPRQVTRCGCNARIKVHVHSRNGRWYVDFFSDEHNHDMLEARFRGMMRSHRAIKMGDLHQINTMRSSGLRVSTIFRAFANQSGGFEMVGFQVKDIYNAIEKQKRAGASDTDNALKYLQMLKRRDPCIFWKYSLDEQWRLHNIFWCDGASQYDFNVFGDVMGFDTTYWRNKYKCPLVIFSGMDHHMRTVVFGCAVLSKEGEESYVWFLWAFLEAMKGKAPKSVITDGDQAMKSAIKAVFPEAHHRLCSWHLLRNATTRVGIPRFMTKFRLCLIGDLEVDD	390

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst9g01687	390	MobiDBLite	consensus disorder prediction	1	21	-	-
	Arst9g01687	390	Pfam	FAR1 DNA-binding domain	56	150	IPR004330	-
	Arst9g01687	390	MobiDBLite	consensus disorder prediction	1	28	-	-
	Arst9g01687	390	Pfam	MULE transposase domain	270	364	IPR018289	-
	Arst9g01687	390	PANTHER	OS01G0519700 PROTEIN	53	389	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst9g01687	Arst-Chr9	32080269	32081628	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Arst9g01687		FAR1	4.2e-20	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst9g01687	-		-	adu:107465331	814.298