Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01659 ATGGGTCTTGGGATGAAATATGACGAAGAAAGCAAGGTGGTTGACGATGGAGGAGAGGGTGGCGGTGGTGGAGCTAATTCGTTTGATTCTGTCTCATGTTCAATTTGCCTTGACGCTGTTATCGATAATGGGGATCGATCGTTGGCTAAGCTTAAATGTGGCCATCAATTTCATCTTGATTGTATTGGTTCAGCATTCAATATGAAAGGAACAATGCAATGCCCTAATTGTCGAAAGATTGAGAAAGGTCAATGGCTTTATGCTAATGGTGGCCGGTCATATCATGATTACAGTATGGATGATTGGACTCATGATGAGGACCTTTATGACCTTAGCTACTCTGAAATGTCCTTTGGAGTTCATTGGTGCCCATTTGGCAACTTGGCGAGACTTCCATCATCTTTCGAGTAAGCCTAACATAATAAGAATGCAGATCATGATATACTGGAAGGACAACATGCTGTATATGCTGAGCATCATAACACAGTTGTAAATTCTGTTAATCATCCTTGCCCATATGTTGCATATTTTGGAGCAATACATCCATCTTCCTCCAACTCAGGTGGAAATGTTTCAGAGATTTCCACCTTCAGTCATTGGAATGGTTCATCTGTGCATAGTGACATGCCCACTTCCTACACGTATCCTACTTTGGATCTTCATTATCATAGTTGGGAACAACATTCCCCTCCTTTCTCTACATACAGTAGTCGTCTAGTTGCCGGTGATCGCCGGTCGATATCTCCTCGGACTCAAAGGCCATCCAGGGGTGGCTCAGAGGTACCAAGATCAAGTTCTTATATGCATCCTCCTGGGGGTCACAGTTCTTCAGGTTCTGTGAGCTCAGTTACTTCCTCAATGCTACCTCCTTATCCTGGTAGCAACGCTCGATCCCGTGATAGTGTTCAAGCGCTTCAAGCTTACTATCAATCACCAATGCGAACACACGTTCCTTCTGGATCCCGAAGATCTGGTAATCATAGTGGATCACCTCAAATTGCACCATTTTCCACATCACCGGACCAAAGCGGTTTCTTTTTTGTCCCATCAAGTTCTTCAGGTCGTAGTAGTTTTCCAGAAGATGCATGTCTCCCAAGTCGCTACCATGCTTGGGAACGAGAGCACATATCTTCTTTAAGCATTGTTGATAGAGATTCAGGCTGGAGACAATACCACCAAACTGTTGGTAGGTCAGAACGCTCTAGCAACTATCGATTAAGGCGTGCATCCGAAAGAATGCATTCCCATAATCGATGA 1257 0.4407 MGLGMKYDEESKVVDDGGEGGGGGANSFDSVSCSICLDAVIDNGDRSLAKLKCGHQFHLDCIGSAFNMKGTMQCPNCRKIEKGQWLYANGGRSYHDYSMDDWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFEXAXHNKNADHDILEGQHAVYAEHHNTVVNSVNHPCPYVAYFGAIHPSSSNSGGNVSEISTFSHWNGSSVHSDMPTSYTYPTLDLHYHSWEQHSPPFSTYSSRLVAGDRRSISPRTQRPSRGGSEVPRSSSYMHPPGGHSSSGSVSSVTSSMLPPYPGSNARSRDSVQALQAYYQSPMRTHVPSGSRRSGNHSGSPQIAPFSTSPDQSGFFFVPSSSSGRSSFPEDACLPSRYHAWEREHISSLSIVDRDSGWRQYHQTVGRSERSSNYRLRRASERMHSHNR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01659 418 SUPERFAMILY RING/U-box 29 80 - -
Arst9g01659 418 PANTHER OS09G0511500 PROTEIN 22 398 IPR044274 GO:0004842
Arst9g01659 418 Pfam Ring finger domain 32 78 IPR001841 -
Arst9g01659 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 87 IPR013083 -
Arst9g01659 418 ProSiteProfiles Zinc finger RING-type profile. 33 78 IPR001841 -
Arst9g01659 418 MobiDBLite consensus disorder prediction 269 348 - -
Arst9g01659 418 SMART ring_2 33 77 IPR001841 -
Arst9g01659 418 MobiDBLite consensus disorder prediction 233 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01659 Arst-Chr9 30089395 30097705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01659 29 78 C3H Transcription Factor Family AT1G53820 40.000 8.76e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01659 - - gmx:100789014 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01659 9 30089395 30097705 Arst9g01659 9 30089395 30097705 ECH
Arst9g01659 9 30089395 30097705 Arst9g01659 9 30089395 30097705 PCT