Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01639 ATGACGACCAACCTTGAAGAAAGTATAGAGGCAAAACGGAGAATCGCCGTCATAGGCATATCTACTGTCATACTAGTCGCTATGGTGGTGGCGGTTACCGTCGGTGTCAGTCAAGTCGACGGGGACGAAAAAAGCACGAAAAACACAAACCATGTGGCTTCGACGGTGAAAGCAGTGAAAGCCCTTTGCCAACCAACAGATTACAAGGAAGAGTGTGAGGAAAGCCTAACTGCCGAAGCTGGCAACACCACGGACCCAAGAGAACTTATCAAGATTGCATTTAATGTAACCATTAACAAGATTGGTGATGGGCTCCAGAAATCACATCTCTTGCAAGAGGTTGAGAAGGAACCTAGGGCCAAGATGGCGCTTGACACGTGTAAGCAGCTCATGAATCTCTCTATTAGCGAGTTTTCGAGGTCATTAGAGAGAATTGGACAGTTTAATCTCAACAACCTCGACGAAATCCTCACAAGCCTAAAGGTATGGCTTAGCGGAGCGGTGACATATCAAGAGACATGTTTGGATTGTTTTGAGAACACAACAAGCAAAGCTGGGGAAAAGATGAAGGAAGCGTTGACCAATGCGACGAAGATGAGCAGCAATGCCCTAAGCATAATCACGGAACTCGCAAATACTTTCTCAGAGTTGAACGAAACGCGGCAAGATAGCTCTCATCGTCGCCTCGAGGATGAGTTCCCATCGTGGGTTGACAATGGTGCTGGGGTACGTAGACTCCTTCTGTCGAGTTCACGCAAGCTGAAGCCCAATGTGATTGTGGCCAAAGATGGCAGCGCAAAGTTCACTAGCATCAATCAGGCTTTGAAGAATGTTCCTCAGAAAAACATGAAGCCATTTGTGATATTCATCAAGAAAGGTGTTTACAAAGAGTATGTTGAGGTTACCAGGGAGATGAGACATGTCGTCTTTGTTGGTGAAGGTGGCGATAAGACACGAATCACTGGCAACAAAAACTTCATTGATGGGACCAACACTTATAAAACTGCTACAGTAGCAATTCAAGGAGATTACTTTATCGCCATCAACATGGGGTTTGAGAACTCCGCAGGTGCCCATAAACATCAAGCAGTAGCAGTAAGGGTCCAAGCAGATAAGTCTATCTTTTACAAATGCTCGTTCGATGGCTACCAAGACACACTCTATGCTCACACCATGCGTCAATTCTACCGAGACTGCACCATCTCAGGCACCATCGATTTCATCTTCGGCGACGCCGTCACCGTCTTCCAAAACTGCACCTTCGTGGTCCGGAAGCCCATGCAGAACCAGCAATGCATCGTGACGGCGCAAGGCCGGAAGGAGAAGCACCAACCTTCAGGAATAGTAATCCACGGCGGCTCGATTGTGGCGGAGCCAGGAGAATCAAAGGACCACAAGAACGTGAAGTTCGATAGCAAGGCTTACTTAGCGCGTCCATGGAAGAATTACTCGAGGACGGTGTTCTTGCAAACATACATCGGAGATTTGATTGAACCCGAAGGGTACATGCCTTGGCAAGGGCCAGAAGGTAATACCGGCATGGATACTTGTTACTATGCAGAGTTCAATAACATTGGCCCTGGTTCAAATGCAACGAAGCGCGTGAAATGGCATGGTGTCAAGCACCTCACGGAAAAATCTGTAGGTGCTTTCTTCCCATCCAAGTTCTTCCATGGTGACGATTGGATTAGGTTTACTAAGGTTCCTTACTCCCCAGGCTTAACTAATTTCACGAAGCACAAAATTTAA 1749 0.4694 MTTNLEESIEAKRRIAVIGISTVILVAMVVAVTVGVSQVDGDEKSTKNTNHVASTVKAVKALCQPTDYKEECEESLTAEAGNTTDPRELIKIAFNVTINKIGDGLQKSHLLQEVEKEPRAKMALDTCKQLMNLSISEFSRSLERIGQFNLNNLDEILTSLKVWLSGAVTYQETCLDCFENTTSKAGEKMKEALTNATKMSSNALSIITELANTFSELNETRQDSSHRRLEDEFPSWVDNGAGVRRLLLSSSRKLKPNVIVAKDGSAKFTSINQALKNVPQKNMKPFVIFIKKGVYKEYVEVTREMRHVVFVGEGGDKTRITGNKNFIDGTNTYKTATVAIQGDYFIAINMGFENSAGAHKHQAVAVRVQADKSIFYKCSFDGYQDTLYAHTMRQFYRDCTISGTIDFIFGDAVTVFQNCTFVVRKPMQNQQCIVTAQGRKEKHQPSGIVIHGGSIVAEPGESKDHKNVKFDSKAYLARPWKNYSRTVFLQTYIGDLIEPEGYMPWQGPEGNTGMDTCYYAEFNNIGPGSNATKRVKWHGVKHLTEKSVGAFFPSKFFHGDDWIRFTKVPYSPGLTNFTKHKI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01639 582 ProSitePatterns Pectinesterase signature 1. 282 301 IPR018040 -
Arst9g01639 582 CDD PMEI-like_3 61 212 - -
Arst9g01639 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Arst9g01639 582 Gene3D - 251 574 IPR012334 -
Arst9g01639 582 Pfam Pectinesterase 257 560 IPR000070 GO:0030599|GO:0042545
Arst9g01639 582 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Arst9g01639 582 PANTHER PECTINESTERASE 24 564 - -
Arst9g01639 582 SUPERFAMILY Pectin lyase-like 255 573 IPR011050 -
Arst9g01639 582 FunFam Pectinesterase 55 211 - -
Arst9g01639 582 NCBIfam pectinesterase inhibitor domain 49 210 IPR006501 GO:0004857
Arst9g01639 582 FunFam Pectinesterase 251 574 - -
Arst9g01639 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 212 IPR035513 -
Arst9g01639 582 ProSitePatterns Pectinesterase signature 2. 401 410 IPR033131 -
Arst9g01639 582 SMART PMEI_2 54 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01639 Arst-Chr9 29478464 29482201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01639 1 574 Carbohydrate Esterase AT3G05610 50.865 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01639 K01051 - gmx:100794799 787.719