Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01624 ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACTGTCATCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGCCGTGCTCCTGTCCGGAACAATGCTGATCGATTCCTGTATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGAAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCAAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCACTGGAACATTTCAAAGCGACTTATCAGTATGGAACGAAGAAAATGTTATTTTGAAATTAGATGTTATGGTGTACATGGTAAACTTGATTTTTGAAGCAAAGGGGAGTGATTTGGGACATTACCATCCTAAAATTCTGAAAGCCTTAACAGAGCAGGCAGAAAAGCTGACGCTGAGCTCTCGAGCCTTTTACAATGATCGGTTTCCACCATTTGCTGAGCATTTGACAAGTATGCTTGGTTATGATATGGTTCTTCCCATGAACACTGGTGCTGAAGGAGTGGAAATAGCTCTGAAATTAGCAAGAAAGTGGGGTTATGAAAAGAAAAGAATTCCCAAAGATGAGGCTATTATTGTGTCATGTTGTGGCTGCTTCCATGGCCGTACACTAGCTGTTATATCTATGAGTTGTGACAATGAAGCTACCCGGGGTTCTAGTCCTTTATTGCCTGGCCATCTTAAAGTTGATTTTGGTGATGCAGAAGCCCTTGAAAGAATTTTTAAAGAAAAAGGAGAACACATAGCTGGCTTTCTTTTGGAACCCATCCAGGGTGAAGCTGGGGTAATCATTCCTCCAGATGGCTATTTGAAAGCTGTTAGAGATCTTTGCACTAGATATAATGTGCTGATGATTGCAGACGAAATACAAACTGGGTTAGCAAGAACAGGGAAGATGCTGGCTTGTGACTGGGAAGAAGTTCGCCCAGATGTTGTAATACTAGGGAAAGCATTGGGTGGAGGAGTTTTTCCTGTGAGTGCAGTTCTTGCAGACAAGGATGTAATGCTTTGTATAAAACCAGGAGAGCATGGAAGTACCTTTGGCGGGAATCCATTGGCCAGTGCTGAACTTCTTAAATCCTATGATTATAAAGTTTTACCTAAAGGAGCTAAAGCTACTGTCTCTCTATGGTTCAGTTGCATTTGA 1266 0.436 MEREDEDATQERRLFRRALSSLLGSIEAAAAARACRAPVRNNADRFLYWSTRFQIVLGVERGLQYLHEDSHLRIVHQDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFTGTFQSDLSVWNEENVILKLDVMVYMVNLIFEAKGSDLGHYHPKILKALTEQAEKLTLSSRAFYNDRFPPFAEHLTSMLGYDMVLPMNTGAEGVEIALKLARKWGYEKKRIPKDEAIIVSCCGCFHGRTLAVISMSCDNEATRGSSPLLPGHLKVDFGDAEALERIFKEKGEHIAGFLLEPIQGEAGVIIPPDGYLKAVRDLCTRYNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVFPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAELLKSYDYKVLPKGAKATVSLWFSCI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01624 421 FunFam Ornithine aminotransferase 156 405 - -
Arst9g01624 421 Pfam Aminotransferase class-III 150 398 IPR005814 GO:0008483|GO:0030170
Arst9g01624 421 SUPERFAMILY PLP-dependent transferases 152 403 IPR015424 -
Arst9g01624 421 CDD OAT_like 152 395 IPR005814 GO:0008483|GO:0030170
Arst9g01624 421 Pfam Protein kinase domain 54 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01624 421 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 324 361 IPR005814 GO:0008483|GO:0030170
Arst9g01624 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Arst9g01624 421 FunFam Os07g0541700 protein 39 117 - -
Arst9g01624 421 ProSiteProfiles Protein kinase domain profile. 1 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g01624 421 SUPERFAMILY Protein kinase-like (PK-like) 45 118 IPR011009 -
Arst9g01624 421 NCBIfam ornithine--oxo-acid transaminase 152 399 IPR010164 GO:0004587
Arst9g01624 421 Gene3D Transferase(Phosphotransferase) domain 1 36 140 - -
Arst9g01624 421 Gene3D - 156 399 IPR015421 GO:0003824
Arst9g01624 421 PANTHER AMINOTRANSFERASE CLASS III 151 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01624 Arst-Chr9 28176969 28180802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01624 47 118 Receptor kinase-like Gene Family AT1G70530 58.333 6.40e-23 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g01624 Aminotran_3 3.5e-80 CL0061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01624 K00819 - egr:104440782 456.447