Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01623 ATGGCAACAACCCTTACAAGTAACAAGGTAGAACTTGATGTGGAGGGTGTGTTGCACACGTCGATTTTCGACGAATTGCCGAAAGCAACAATCGTTTCGGTGTCGCGACCGGAGACCGGAGAAATTAGCCCAATCTTGCTTTCTTATACAATTGAGTTGGAGTACAAGCAGTTCAAGTGGCGTCTTCACAAGAGAGCAGCGCAAGTTCTCTACTTACAGTTTGCCCTGCGGAAACGTGTACTAATTGAACAACTTCATGACAAACAAGAGCAGATAAAAGAATGGCTTCAGAGCTTAGGAATAGTAGATCACACAGTGACGATACACGATGATGAAGAACCTGATGATGGAGCTGTGCCTTTACATCACGAAGACAGTGTTAAAAGCAGATATGTCCCATCTGTTGCTGCTCTATCAATAATTCGTCCATCATTAGGAGGGCAGCAATCGGTTGTAGACAGGGCAAAAGTCGCAATGCAAAGTTATTTGAATCTTTTCTTAGAAAACCTGGATATTGTTAATTCTCCAGAGGTCTGCAGGTTTTTGGAAGTCTCCAAGCTATCCTTTTTACATGAGTATGGTCCAAAGCTGAGAGAGGGATATGTGACAGTGAAGCATTTATCAAATGTTTCACAGGATTCAGAAGCATGCCATCCATGTGATTGGCTTCGTGGCTGTAATAACAGCTGGAAGAAGGTATGGGCTGTTTTGAAACATGGATTTTTGGCCTTGCTGGATGGCCCTTTCAGCAATATACCGCTGGACATACTTGTTTTTGATGTTCTTCCATCCTCAAAAGGAGATAAAACACAAATACATTTAGCTGATCCTGTAAAGGAATGTAATCCTTTGCGATACACATTTAAGGTTACTAGTGGGAATAGGACCATATCATTGAGAACTACCAGCAATGGTAGGGTTAAAGCTTGGGTAAATGCAATTAATGAAGCTGGTCTTCGACCTTCGGAGGGTTGGTGTCGTCCTCATCGGTTTGCTTCATTTGCTCCTGTAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAGTGGTTTGTAGACGGAAAGGCAGCATTTCAAGCAATTGCTTCTTCAATTCAAGCTGCAAAATCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCCGAGCTATATCTTAAACGTCCTTTTGATGGCTTTTCAAAACTCAGACTTGACTCGTTGCTAGAAGAAAAAGCTATGCAAGGAGTTCAGATATATGTGCTTCTCTACAAGGAGGTTTCTCTGGCTTTGAAAATCAACAGCTCGTATAGTATGAGAAGACTCCTCAAAATTCATGAGAATGTGAGGGTATTGCGCTATCCTGACCATTTAACCAGTGGCGTGTATTTATGGTCGCACCATGAGAAACTTGTAATTGTTGATTACAAGATTTGCTATATTGGAGGATTAGACTTATGCTTCGGTCGATATGACACGCCTGACCATAAAGTTGGTGATTGCCCCTCTATTACATGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCATGGGAAGACACGATGAGAGATGAATTGGATCGTGAGAAATATCCTCGTATGCCATGGCATGATGTCCATTGTGCCCTTTGGGGACCTCCTTGTCGTGATATTGCTCGACATTTCATTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAGCATGAAATCCCGCTACTTATGCCTCACCATCACATGGTCCTCCCTCATTACATGGGAAAAAGCAAAGATATGGACATTACTGGAAAGAAAGATGAAGATGGCACGAAAGAACTTGAGAGTAAGGATTCATTTTCGGAGTCTCCGGTACAAGATATACCGCTGCTTTTACCTCAAGAATCTGGTGGACTAGTTACTTCGCTCGGAGATCATTCCAATATTAGTGAAAAGGTTCCATTATCATCCCAAAAGTTGGAAAATGAAACATCAACTCCAAACACAAAGATCAATGGGTTTCATGATGAAGTTGTTCCTTTTGACCTTGGTGCACAATCTGTTGTTTATGATCTAGACGATTGGTGGGAAACACCAGATGAAGGTACCAAACACGATAATAATTTGGAATATAGACAAGTTGGTCCACGTACTTCTTGTCGCTGTCAGGTAATCAGAAGTGTCGGCCAATGGTCAGCTGGAACCAGTCAGCATGAAGAAAGCATTCACACAGCATATTGTTCTCTTATTGAAAAAGCAAAGCATCTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAAAGGATGATACAATTCAGAACCGTGTATTGGAAGCACTATACAGGCGCATTTTACAAGCACACAAGGAACAGAATAAATTTAGAGTTATAGTTGTGATGCCCCTCTTGCCTGGGTTCCAAGGTGGTCTTGATGATGGTGGTGCTGCAACTGTCAGGGCTTTAACACATTGGCAGTATAGAACAATTTCAAGGGAAAAGCATTCTATATTACACAATCTTGAAGCTAAAATTGGTCCTAAGGCTCATGATTATATTTCTTTCTATGGTCTACGATCTCATGGTAGACTTCATGCCGATGGTTACGTGGCCACAAGTCAGGTATATGTGCATAGTAAATTGATGATAATAGATGACCGTGTAGCTGTCATCGGATCATCTAACATTAACGACCGTAGTCTGCTTGGGTTAAGAGACTCTGAGATAGGAGTGGTTATAGAAGACAAGGAATATGTTGAATCATTGATGAATGGAAAACCATGGAAAGCTGGGAAATTTTCTTATAGCCTCCGTTGTTCCTTATGGTCTGAACACCTTGGCCTTCATACAGAAGAGGTCAGTAAAATCAGTGATCCATTGGCAGACACAACATACAAGGACTTGTGGTCAGCAACTGCGAAGGAGAATACTAGGATATATGATGAGGTCTTCGGTTGCATTCCGAATGATCAGATACACTCAAGATCTGCTCTTCGACAGAGCATGACTCAGCGGAAAGAAAAGGTGGGTCACACCACCATAGATTTGGGAATAGCCCCTGATAAATTAATAACTAGTGATGTCTATGGAGAAATCAATGAGACAAATTCAATGGATAGATTGAACTCTGTAAAGGGACATCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGATGAAGATCTAAGACCAGCCTTTATTGAGAGTGAGTTTTACGTAGCTCCTCAAGTATATCATTAG 3207 0.4163 MATTLTSNKVELDVEGVLHTSIFDELPKATIVSVSRPETGEISPILLSYTIELEYKQFKWRLHKRAAQVLYLQFALRKRVLIEQLHDKQEQIKEWLQSLGIVDHTVTIHDDEEPDDGAVPLHHEDSVKSRYVPSVAALSIIRPSLGGQQSVVDRAKVAMQSYLNLFLENLDIVNSPEVCRFLEVSKLSFLHEYGPKLREGYVTVKHLSNVSQDSEACHPCDWLRGCNNSWKKVWAVLKHGFLALLDGPFSNIPLDILVFDVLPSSKGDKTQIHLADPVKECNPLRYTFKVTSGNRTISLRTTSNGRVKAWVNAINEAGLRPSEGWCRPHRFASFAPVRGLTEDGSQAQWFVDGKAAFQAIASSIQAAKSEIFITGWWLCPELYLKRPFDGFSKLRLDSLLEEKAMQGVQIYVLLYKEVSLALKINSSYSMRRLLKIHENVRVLRYPDHLTSGVYLWSHHEKLVIVDYKICYIGGLDLCFGRYDTPDHKVGDCPSITWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCALWGPPCRDIARHFIQRWNHAKRTKAPNEHEIPLLMPHHHMVLPHYMGKSKDMDITGKKDEDGTKELESKDSFSESPVQDIPLLLPQESGGLVTSLGDHSNISEKVPLSSQKLENETSTPNTKINGFHDEVVPFDLGAQSVVYDLDDWWETPDEGTKHDNNLEYRQVGPRTSCRCQVIRSVGQWSAGTSQHEESIHTAYCSLIEKAKHLIYIENQFFISGLAKDDTIQNRVLEALYRRILQAHKEQNKFRVIVVMPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILHNLEAKIGPKAHDYISFYGLRSHGRLHADGYVATSQVYVHSKLMIIDDRVAVIGSSNINDRSLLGLRDSEIGVVIEDKEYVESLMNGKPWKAGKFSYSLRCSLWSEHLGLHTEEVSKISDPLADTTYKDLWSATAKENTRIYDEVFGCIPNDQIHSRSALRQSMTQRKEKVGHTTIDLGIAPDKLITSDVYGEINETNSMDRLNSVKGHLVSFPLEFMRDEDLRPAFIESEFYVAPQVYH 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01623 1068 Gene3D Endonuclease Chain A 685 926 - -
Arst9g01623 1068 MobiDBLite consensus disorder prediction 640 661 - -
Arst9g01623 1068 CDD PLDc_vPLD1_2_yPLD_like_1 347 492 - -
Arst9g01623 1068 SMART pld_4 454 481 IPR001736 GO:0003824
Arst9g01623 1068 SMART pld_4 863 890 IPR001736 GO:0003824
Arst9g01623 1068 PIRSF PLD_euk 27 1068 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst9g01623 1068 Gene3D Endonuclease Chain A 340 576 - -
Arst9g01623 1068 FunFam Phospholipase 695 917 - -
Arst9g01623 1068 PIRSF PLD_euk 27 1068 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst9g01623 1068 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 863 890 IPR001736 GO:0003824
Arst9g01623 1068 MobiDBLite consensus disorder prediction 586 609 - -
Arst9g01623 1068 SUPERFAMILY Phospholipase D/nuclease 303 574 - -
Arst9g01623 1068 SUPERFAMILY Phospholipase D/nuclease 701 913 - -
Arst9g01623 1068 CDD PLDc_vPLD1_2_yPLD_like_2 723 907 - -
Arst9g01623 1068 MobiDBLite consensus disorder prediction 640 662 - -
Arst9g01623 1068 MobiDBLite consensus disorder prediction 586 617 - -
Arst9g01623 1068 CDD PH_PLD 173 317 - -
Arst9g01623 1068 Gene3D - 198 322 IPR011993 -
Arst9g01623 1068 PANTHER PHOSPHOLIPASE D 156 1052 IPR015679 -
Arst9g01623 1068 Pfam Phospholipase D Active site motif 454 481 IPR001736 GO:0003824
Arst9g01623 1068 ProSiteProfiles PH domain profile. 195 319 IPR001849 -
Arst9g01623 1068 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 454 481 IPR001736 GO:0003824
Arst9g01623 1068 SUPERFAMILY PH domain-like 225 317 - -
Arst9g01623 1068 SMART PH_update 196 321 IPR001849 -
Arst9g01623 1068 Pfam PLD-like domain 736 910 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01623 Arst-Chr9 27764322 27777847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01623 22 1068 Phospholipase D Gene Family (Wang group) AT3G05630 65.722 0.0 1387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01623 K01115 - gmx:100796914 1748.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01623 9 27764322 27777847 Arst9g01623 9 27764322 27777847 ECH