Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01565 ATGGAGGCAGTTGGTGGTTCTGGAAACGCTCTGTTTTCGGGCAAGGGAAATGGATTGGAAGCTTTGGTAGTGAGTAATTTGAAGAGGGTGCAGGAAGTTGAAGAAGCTAGCAATGAAGGTTCAATGTGGAATTCTGAAGAGGATGATGAGAGAACTGATGAGGTGGTGGTTGAGGAGAGTGGGAAGAAGAAGAAGAAGAAGGGGATGCCGTCCAAAAATCTTATGGCGGAGAGGCGGCGAAGGAAGAAGCTCAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAATATTAGCAAGATGGATAGAGTTTCGATACTTGGAGATGCAATTGACTACATGAAGGAGTTACAGCAGCGGGTCAATGATCTTCAAAATGAACTGGAGTCAACTCCAACTAGCTCTTCGCCATCATCTTCCACCAGCATTCAACCTTTGACACCCACACTGCAAACCCTTCCTTGCCGGGTGAAGGAAGAACTGTGTCCCGTGCCAATCCCAGGAAACCAAACAGCAAAGGTGGAAGTTAAGGTAAGGGACGGCAAAGCTGTCAACATTCACATGTTTTGTAGCCGCCGACCAGGTCTTCTGGTCTCTACAATGCAGGCTTTGGATAACCTCGGATTAGATGTTCAACAAGCTGTTATTAGCTGCTTCAATGGTTTTGCTTTAGACATCTTCAAAGCTGAGCAATGCAGAGAAGGGCAGGATGTGCTTCCTGAGGAAATCAAAGCAGGTCTGCTGGATTCAGCAGGTATCCATGATATGATGTGA 774 0.4638 MEAVGGSGNALFSGKGNGLEALVVSNLKRVQEVEEASNEGSMWNSEEDDERTDEVVVEESGKKKKKKGMPSKNLMAERRRRKKLNDRLYMLRSVVPNISKMDRVSILGDAIDYMKELQQRVNDLQNELESTPTSSSPSSSTSIQPLTPTLQTLPCRVKEELCPVPIPGNQTAKVEVKVRDGKAVNIHMFCSRRPGLLVSTMQALDNLGLDVQQAVISCFNGFALDIFKAEQCREGQDVLPEEIKAGLLDSAGIHDMM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01565 257 SMART finulus 74 123 IPR011598 GO:0046983
Arst9g01565 257 MobiDBLite consensus disorder prediction 33 80 - -
Arst9g01565 257 Pfam Helix-loop-helix DNA-binding domain 75 118 IPR011598 GO:0046983
Arst9g01565 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 136 IPR036638 GO:0046983
Arst9g01565 257 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 41 253 - -
Arst9g01565 257 FunFam BHLH transcription factor 64 132 - -
Arst9g01565 257 Gene3D - 57 132 IPR036638 GO:0046983
Arst9g01565 257 CDD bHLH_AtAMS_like 71 129 - -
Arst9g01565 257 MobiDBLite consensus disorder prediction 55 80 - -
Arst9g01565 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
Arst9g01565 257 Coils Coil 107 134 - -
Arst9g01565 257 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01565 Arst-Chr9 25295874 25302302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01565 32 230 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 66.509 1.24e-90 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g01565 HLH 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01565 - - ahf:112697118 435.261