Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01553 ATGGAGGGAAAAGATGAAGATGTGAGAGTTGGAGCAAATAGGTATAGAGAGAGACAAGCAATAGGAACAGCAGCACAAGCAGAAGAAGATGGGAAGGACTATAAGGAACCACCATCAGCACCATTGTTTGAGGCTGGTGAATTGTCATCCTGGTCCTTCTACAGGGCATGCATAGCTGAGTTTGTGGCCACGTTTTTGTTTCTCTACATCACAGTGTTGACAGTTATGGGTGTGGCTAAATCCAGTAGCAAGTGTAACACTGTTGGTGTTCAAGGGATTGCTTGGGCTTTTGGTGGCATGATCTTTGCTCTTGTCTATTGTACTGCTGGAATCTCAGGGGGTCACATAAACCCAGCAGTGACATTTGGTCTGTTCTTGGCGCGAAAGCTGTCACTAACAAGAGCAGTGTTCTACATAATGTTTCAGTGTTTGGGGGCCATTTGTGGTGCTCTGGTTGTAAAGGGGTTCCAGCCACACCAATTTGAAAGGCTTGGTGGCGCTGCCAACTCTGTTAGCAGAACCTACTCCAAAGGTGGTGGCCTTGGTGCTGAGATTGTTGGCACTTTTGTTCTTGTTTACACTGTTTTCTCTGCCACTGATGCCAAAAGAAATGCCAGAGACTCCCATGTTCCTATTTTGGCACCATTGCCTATTGGTTTTGCTGTATTTTTGGTGCATTTGGCTACAATTCCTGTCACTGGAACTGGCATCAATCCAGCTAGAAGTCTTGGTGCAGCCCTTGTTTATAACAAGGACCAAGCTTGGGATGACCATTGGATCTTCTGGGTAGGCCCCTTCATTGGGGCAGCACTTGCAGCTTTGTACCATCAAATTGTGATTAGGGCCATTCCCTTCAAGTCAAAGTAA 867 0.4625 MEGKDEDVRVGANRYRERQAIGTAAQAEEDGKDYKEPPSAPLFEAGELSSWSFYRACIAEFVATFLFLYITVLTVMGVAKSSSKCNTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIMFQCLGAICGALVVKGFQPHQFERLGGAANSVSRTYSKGGGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPVTGTGINPARSLGAALVYNKDQAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01553 288 Pfam Major intrinsic protein 47 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 CDD MIP 55 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 PRINTS Major intrinsic protein family signature 259 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 FunFam Probable aquaporin PIP1-2 40 288 - -
Arst9g01553 288 NCBIfam MIP family channel protein 59 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst9g01553 288 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Arst9g01553 288 Gene3D Glycerol uptake facilitator protein. 40 287 IPR023271 -
Arst9g01553 288 SUPERFAMILY Aquaporin-like 48 281 IPR023271 -
Arst9g01553 288 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 284 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01553 Arst-Chr9 24364109 24367163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01553 1 288 Major Intrinsic Protein MIP AT3G61430 82.292 1.87e-172 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01553 K09872 - cave:132192212 526.939