Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01549 ATGGATTTCAAGGGTTTCCTAAACGACTTGCAGGATTGGGAACTTTCTCGAAAACACGAAGAAGCTCCACACACGAACAAAAACCCTCAAAAGGAAAATGTTGCTTCTCAAAATACTGGATTGGGGTCCTCAAGGCGCGATACTCTTTCTTTTGATAATGCAAGAAGTAACTCTCGACAGTATAATGATCCATTTAGCCGTGTGACTAGTAGTTTTGTTTCCGAAGATATCCCTGACGCCGTGTCCGAGAAAGATCTGGGTAATGAGTATTTCAAGCAGAAAAAATATAAGGAAGCTATAGACTGCTATTCAAGAAGCATTGCCTTCTCGCCTACAGCTGTAGCATATGCAAATAGAGCAATGGCCTATATCAAGCTCAGAAGATTCCAAGAGGCTGAGGATGACTGTACAGAGGCCTTAAATCTCGATGATCGTTACATAAAAGCATACTCACGCCGAGCAACATCTAGAAAAGAACTCGCGAAATTTAAAGAATCCATGGAGGATGCGGAGTTTGCCTTAAGGTTGGAACCTAACAATCAAGAAATTAAGAAACAGCATGCTGATGCCAAGTCTTTGTACGACAAAGCAATGCTTGATAAAGTATCTGGAGCTCTGAAAAGCACTGTAAAGGGCACTCAAAAAGAAGTGAAGTTGGACACAAAAAAGAATGGAGGCAGCATCCATCCCATTTCACATATTACTCAAAAGTCCGGGCCAGCTAAGGGTAATGAGCAGCAAATTCCAGCTAAAGAGTCATACATAATGGAGGAGGTAGATAGTAATAAAATCAGAAGCAGGGCTCAAAGACAAGAGGCAGATGGTTCTAGTTCAAGCAACAACGTCCAGCATGTTAAGAGAAATCAGAAAGGTAGTAAGCAGCACGTGCAAACATCTATTCAACAACTTGCTTCTCGTGCAGCTTCTCTAGCTACGGCTGAAGCTGCAAAGAACATAACACCACCAACTACAGCTTATCAGTTTGAGGTCTCCTGGAGAGGGTTTTCAGGTGATCGTTCTTTGCAGACTTGCCTGTTAAAGGCCATATCTCCTCATGAATTACCAAAAATATTCAAAAATGCCCTCTCTACTGCCTTGCTGATTGACATCATCAAGTGTGTGGCATCTTTTTTCAATGAACAAATGGATCTAGCTGTCAGTTATATGGAGCATTTGACCAAGGTACCAAGATTTGACATGATTGTGATGTGCCTTCCATCAACAGATAAAGATGACTTACGCAAGATCTGGGACGAAGTGTTCTGTGGCGAGGCAACGCCAATGGAGTTTGCGGAGATTCTGGACAACCTGCGATCGAAATACTGCCTTGGGCAGTAG 1338 0.4253 MDFKGFLNDLQDWELSRKHEEAPHTNKNPQKENVASQNTGLGSSRRDTLSFDNARSNSRQYNDPFSRVTSSFVSEDIPDAVSEKDLGNEYFKQKKYKEAIDCYSRSIAFSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATSRKELAKFKESMEDAEFALRLEPNNQEIKKQHADAKSLYDKAMLDKVSGALKSTVKGTQKEVKLDTKKNGGSIHPISHITQKSGPAKGNEQQIPAKESYIMEEVDSNKIRSRAQRQEADGSSSSNNVQHVKRNQKGSKQHVQTSIQQLASRAASLATAEAAKNITPPTTAYQFEVSWRGFSGDRSLQTCLLKAISPHELPKIFKNALSTALLIDIIKCVASFFNEQMDLAVSYMEHLTKVPRFDMIVMCLPSTDKDDLRKIWDEVFCGEATPMEFAEILDNLRSKYCLGQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01549 445 MobiDBLite consensus disorder prediction 228 243 - -
Arst9g01549 445 ProSiteProfiles TPR repeat profile. 147 180 IPR019734 GO:0005515
Arst9g01549 445 MobiDBLite consensus disorder prediction 271 298 - -
Arst9g01549 445 Pfam Tetratricopeptide repeat 113 143 IPR001440 GO:0005515
Arst9g01549 445 Pfam Tetratricopeptide repeat 84 112 IPR001440 GO:0005515
Arst9g01549 445 MobiDBLite consensus disorder prediction 210 246 - -
Arst9g01549 445 SUPERFAMILY TPR-like 73 192 IPR011990 GO:0005515
Arst9g01549 445 MobiDBLite consensus disorder prediction 14 62 - -
Arst9g01549 445 MobiDBLite consensus disorder prediction 263 298 - -
Arst9g01549 445 MobiDBLite consensus disorder prediction 28 62 - -
Arst9g01549 445 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
Arst9g01549 445 PANTHER OS05G0129900 PROTEIN 1 444 - -
Arst9g01549 445 SMART tpr_5 147 180 IPR019734 GO:0005515
Arst9g01549 445 SMART tpr_5 114 146 IPR019734 GO:0005515
Arst9g01549 445 SMART tpr_5 80 113 IPR019734 GO:0005515
Arst9g01549 445 Gene3D Tetratricopeptide repeat domain 69 178 IPR011990 GO:0005515
Arst9g01549 445 Pfam Potential Monad-binding region of RPAP3 321 410 IPR025986 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01549 Arst-Chr9 24268365 24273513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01549 84 176 U-box Gene Family AT3G07370 31.915 6.78e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01549 K23002 - gmx:100784528 597.816