Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01547 ATGGCACTTTCATTATCATCATCATCATCCCAACCATCACAAGTAGATGTTCACTGCTTTCAAAGCCTTAAGAATAATGCAAATGCAAGTTCTCTCAATCGTGACACCTTCTACCTCAAACTCACTCACTTGTTCGATTCCTCTGGACTCACCCTAATTTTCAATGTCCGAGAAACATTGCTGGACTTGTACCTAGTTTACTTGGAGGTGACCACAAGAGGAGGATTCCATCAGGTTAGTCAAGAAAAGAAATGGGGCGAAGTGGCCTCGGCCCTGAGATTGGAAGGAAACATTGCAAGATTATCTGCTCAAGTTGAAAAGCTCTACTTGCAACTTCTTTACCAATTCGAGCAATTGTACTTCTACAGAGCTCCTACAAAGAGCAGCAAGACCACAGGTTTGCACAAGAGGAAGCAAATCTCATCCGAAACGACAGAAGAAGGAGGAGCTGGGTTGGTCAAAGAGCAAGCTCTTCTTCTCGAACCATCGGATGGCAAAGAAAAGAAGAAACGCCGAGGCATGGCGCAAGGACAAAGAAGTGCATACCAGATGTTCCTGAAGCAAGAATGCACTCGCTTGAAAAGTTGTAACTCGACCTCAACCGGAAAGGGTATTCTCCACACGGCTATCGATTCGTGGAGGAATATGTCTCCACTTGAGAAACAGCCATATGTGGATGAATTCAAGAAGAACCAGGAAAAGTTCAAGAAAGGAACGATTATTGATGACAATGGAGAGCACAAAATAATGCAAAATGAGAAGGAAGAGAAGAACATGGCTCCTACTAGTGTGTGTAATAGTGAGTACTACCAAGTAACTTCACAACCTGAGCCAGATAACAATAACTACACTAGTCTCAACAACAATGCAGCAATAGGCTTAGCTTTTAATGTGACTGAAAAGTTTCCCAAGGATTCCGTGTTACTATTTGGCTTATAG 939 0.4281 MALSLSSSSSQPSQVDVHCFQSLKNNANASSLNRDTFYLKLTHLFDSSGLTLIFNVRETLLDLYLVYLEVTTRGGFHQVSQEKKWGEVASALRLEGNIARLSAQVEKLYLQLLYQFEQLYFYRAPTKSSKTTGLHKRKQISSETTEEGGAGLVKEQALLLEPSDGKEKKKRRGMAQGQRSAYQMFLKQECTRLKSCNSTSTGKGILHTAIDSWRNMSPLEKQPYVDEFKKNQEKFKKGTIIDDNGEHKIMQNEKEEKNMAPTSVCNSEYYQVTSQPEPDNNNYTSLNNNAAIGLAFNVTEKFPKDSVLLFGL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01547 312 Coils Coil 91 111 - -
Arst9g01547 312 SUPERFAMILY ARID-like 30 123 IPR036431 GO:0003677
Arst9g01547 312 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 168 268 - -
Arst9g01547 312 Gene3D - 16 140 IPR036431 GO:0003677
Arst9g01547 312 Pfam ARID/BRIGHT DNA binding domain 34 117 IPR001606 GO:0003677
Arst9g01547 312 SUPERFAMILY HMG-box 164 237 IPR036910 -
Arst9g01547 312 Gene3D High mobility group box domain 161 239 IPR036910 -
Arst9g01547 312 SMART ARID_2 28 117 - -
Arst9g01547 312 ProSiteProfiles ARID domain profile. 31 121 IPR001606 GO:0003677
Arst9g01547 312 Pfam HMG (high mobility group) box 179 237 IPR009071 -
Arst9g01547 312 SMART bright_3 32 122 IPR001606 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01547 1 132 ARID Transcription Factor Family AT3G13350 29.577 8.89e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Arst9g01547 ARID 5.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01547 - - aip:107615356 585.874