Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01538 ATGTCGGACACCGAAGGCATAGACCAATACGGCGTGCTCCTCTACTACAAGTATGCCCACATCCCCAACCTCGACGACCTCCTCTCCTTCTATCACTCCAACTGCTCCCAACTCTCCCTCCTCGGCCGCGTTCGCCTCTCTTCCCGCGGCGTCAATGTTACTGTTGGTGGGAAATTGTCGTGCTTGGAGAGCCACATTGAAGCCCTCAAGGCCAAGGACTGTGTGTTCGAAGGGACCGATTTCAAGCTTGCTACTTGTGACGAGCCGCTAAACGATAGGGTCGCCGAGGAGTGTGGATTCACTTCTCTTTCCATTCGAATCGTCGAGGAACTAGTTACTCTCAGTTCTCATCCCTTGTTAAAGTCACCGGAGATTTCAAATGCTGGAAGACATCTTTCAGCATCTGAGTTTCATTCTTCCCTTCAAAATGCTGATCAGAAGAGTCAAGGAAACGGCCTTGTGTTACTTGATGCAAGGAATCTGTATGAAACAAGAATCGGGAAATTCCATGCACCAAATGTCGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTATCCTCGTGGATAGATGATAATAGTGAGCAGCTGAAAGGAAAACATGTCCTTATGTATTGTACTGGAGGAATCAGGTGTGAAATGGCATCTGCGTATATTAAGTCAAAAGGTGCTGGCTTTGAGAATGTGTTTCAGTTGTTTGGTGGTATCCAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAGGGGAAAAATTTTGTGTTTGATCACCGGATTTCTGTAGGAAGTTCAGATACTAATGTTCTTGGTACATGCCTTATCTGTCATCGTTCATTTGATGATTATTCTTCACGCTGCCGATGTACTTATTGTAGAATGCTTGTCTTAGTTTGTCATAATTGTCAGAATGAAGCTGCATTGTATGTTTGTGAGTTGTGCCAGAAGCAGGGCAAATCTATTCAGTCAATGCAGTTAATTGATACTGGTGAATTGAAAACCCCATTGGAAGGTGCTGAGTTGCAAAATTCATCTTCAAATGCTACATTATCACCTCAAATGCCTAAGGGAGATGGTAAGATGTCAGGTCCTCTAGAAAGCTTAGAATCTTATGCTTGCACGGGTTTCGGCAGAACGCTTCCAGTTTTAAGGGAAGAACATCGTCATTAG 1173 0.4416 MSDTEGIDQYGVLLYYKYAHIPNLDDLLSFYHSNCSQLSLLGRVRLSSRGVNVTVGGKLSCLESHIEALKAKDCVFEGTDFKLATCDEPLNDRVAEECGFTSLSIRIVEELVTLSSHPLLKSPEISNAGRHLSASEFHSSLQNADQKSQGNGLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDLSSWIDDNSEQLKGKHVLMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDTNVLGTCLICHRSFDDYSSRCRCTYCRMLVLVCHNCQNEAALYVCELCQKQGKSIQSMQLIDTGELKTPLEGAELQNSSSNATLSPQMPKGDGKMSGPLESLESYACTGFGRTLPVLREEHRH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01538 390 SUPERFAMILY FYVE/PHD zinc finger 271 319 IPR011011 -
Arst9g01538 390 Gene3D - 2 112 - -
Arst9g01538 390 Gene3D - 121 279 IPR036873 -
Arst9g01538 390 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 263 IPR036873 -
Arst9g01538 390 FunFam Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 119 277 - -
Arst9g01538 390 SMART rhod_4 139 246 IPR001763 -
Arst9g01538 390 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Arst9g01538 390 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Arst9g01538 390 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 7 339 IPR020936 -
Arst9g01538 390 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Arst9g01538 390 MobiDBLite consensus disorder prediction 342 363 - -
Arst9g01538 390 Pfam Rhodanase C-terminal 251 316 IPR022111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01538 Arst-Chr9 23593102 23597700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01538 5 320 Sulfurtransferasese or Rhodanese AT1G09280 73.101 3.47e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01538 - - aip:107618651 776.163