Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01475 ATGGAAAGATGGCATGCAGTTGCTTCCTGGACTTGGGATGCTCAAGATGAAACGTGTGGCATTTGTAGGATGGCCTTTGATGGATGCTGTCCTGACTGTAAACTTCCTGGCGACGACTGCCCACTGATGTGGGGAGCATGCAATCATGCATTTCATTTGCACTGTATTCTAAAATGGGTGAATTCTCAGACATCACAAGCTCATTGTCCCATGTGCCGAAGAGAATGGCAGTTTAAAGCGTGA 243 0.4691 MERWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLMWGACNHAFHLHCILKWVNSQTSQAHCPMCRREWQFKA 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01475 80 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Arst9g01475 80 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 2 79 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Arst9g01475 80 PANTHER RING BOX 2 79 - -
Arst9g01475 80 FunFam Anaphase-promoting complex subunit 11 1 80 - -
Arst9g01475 80 CDD RING-H2_APC11 16 78 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Arst9g01475 80 SUPERFAMILY RING/U-box 2 79 - -
Arst9g01475 80 ProSiteProfiles Zinc finger RING-type profile. 30 73 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01475 Arst-Chr9 21287845 21289798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01475 30 73 C3H Transcription Factor Family AT1G72220 41.304 9.46e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01475 K03358 - twl:119990773 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01475 9 21287845 21289798 Arst9g01475 9 21287845 21289798 ECH