Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01474 ATGTCAGTGCCGTCGACTGAAGTGGATTTGGGTCATGATGATGATGTCATACCTTGGTTGGATTATACAATGGATGGCTCTTTGCAGAATGAGTATGGTTCTAATTTCTTACATGAACTATCCGGGGTCACGGATCAAGACTTGCCCTCAAATCATTTTTCGCTTGTGGATAAAAGTAGTGGTAATCAGGTATTTAGGGACTCTCATAAGAATTCTGCAGAGCAAAGCAACTTTTCCAGTGTTTCTTCGACCGGCGTAGATGAGACAACTAGACCTAAAGCTAGCACGGTTGAATCATACCTGCCATCATCATTCATTTCAGTTAGACCAAGAGTATCGGATGTTACTGCGAACAATACCAGTAATGCAATGCTTCATCCACCAGTTACTGAGATTCCTTCTTCATCGAGTGATTTTTCGAGCTTAAAGATGCAGAAGCAAGATCAAGTTATTCCTAGCAATGGTTCATCTGTTATGAATTTCTCCCATTTCGCAAGGCCTGCCGCCATCGTGAGAGCTAATCTTCAGAACATTGGATTGAAGTCTGTTTCGTCTTCAACAAGATCTGAAAATGTGGAAAGTATGAATAAAGGTGCTGTTGTACCTAGCAGTAATCTTCCAGAATCAACTCTTGCCGATTCATGTAGTGAATGTCCAAAGGTTCTAATGGGGAACAATGAGAAGGCTGTGGAACAATCCAGGGATGATTTGAAACTGTTGGAGTCAAAATCTCTCGAACAGAACATTGCCGGTTCTAAACAATTAGACCCTACTTGCAAAGAGAAAGCCATTAAAATTGATCAAACTTCCAACCGAGTTCTTGGTGAAACTGCCACTAACACACAGATAGCTGCTGAAAGAAGTACGGAGCTGGTGGTAGCCTCTTCCTCTGTTGGCTCTGGCAACTGTGCAGACAGAGGTTCAGACGATCCAATTCAAAATTTGAAGCGGAAAAATCGAGACACTGAGGACTCTGAATGGCATAGTGATGATGTTGAGGAAGAATCAGTGGGTGTTAAAAAAGCAGCTGCTGGGCGTGGAGCTTCGGGTTCCAAGAGAAGTCGTGCTGCTGAAGTGCATAATCTTTCTGAAAGGAGGCGAAGAGATAGGATCAACGAGAAGATGCGTGCATTACAAGAACTCATACCCAATTGCAATAAGGTGGATAAAGCTTCAATGCTGGATGAGGCTATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATGATGTCAATGGGAGCCGGTTTGTATATGCATCCGATGATGTTGCCACATGGAATGCAGCACATGCATGCACCACACTTGGCTCCTTTTTCGCCTATGGCCTATGGAATGCAAATGGGATTGGGTATGGGATATGGCATGGCTATGCCTGATATGAATGGTGTATCATCTCGATTCCCAATGGTTCAGGTTCCCCAAATGCAAGGAACTCATGTCCCTGTTGCACAAATGTCTGGACCTACTGCAATGGTTAGATCAAATACTCAAGGGTTCGGGGTTCCAGGTCAGGGATTTCCCTTGCCACTCCCTCGTGCACCCTTATTTCCTTTCTCGGGAGGGCCGGTTATGAACTCATCGTCGGCTTTGGGATTACGTCCTTGTGGAACAACAGGGCTTAGTCAAACTGCGGATCTGGCGTCAACATCTGGCTTAAAGGACCCTTCGCCAAATACGGATTCACTAGTAAAGCAAAGTACTGGTGGTGGCGGCTGCGACTCAACTAGTCAGATGCCTATCCAGTGTGAAGCAGCAGCAACAACTGTTGGATTTGAACAGTCATCAATGGTACATAATAGCAGCCATACCTCTGAGGCTAATGACAGTGGAACTCTTAATCCTGACAAAGAAGATAATAACCTTGTGACTGGTTATGATGATTGA 1887 0.443 MSVPSTEVDLGHDDDVIPWLDYTMDGSLQNEYGSNFLHELSGVTDQDLPSNHFSLVDKSSGNQVFRDSHKNSAEQSNFSSVSSTGVDETTRPKASTVESYLPSSFISVRPRVSDVTANNTSNAMLHPPVTEIPSSSSDFSSLKMQKQDQVIPSNGSSVMNFSHFARPAAIVRANLQNIGLKSVSSSTRSENVESMNKGAVVPSSNLPESTLADSCSECPKVLMGNNEKAVEQSRDDLKLLESKSLEQNIAGSKQLDPTCKEKAIKIDQTSNRVLGETATNTQIAAERSTELVVASSSVGSGNCADRGSDDPIQNLKRKNRDTEDSEWHSDDVEEESVGVKKAAAGRGASGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMHPMMLPHGMQHMHAPHLAPFSPMAYGMQMGLGMGYGMAMPDMNGVSSRFPMVQVPQMQGTHVPVAQMSGPTAMVRSNTQGFGVPGQGFPLPLPRAPLFPFSGGPVMNSSSALGLRPCGTTGLSQTADLASTSGLKDPSPNTDSLVKQSTGGGGCDSTSQMPIQCEAAATTVGFEQSSMVHNSSHTSEANDSGTLNPDKEDNNLVTGYDD 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01474 628 MobiDBLite consensus disorder prediction 542 577 - -
Arst9g01474 628 Pfam Helix-loop-helix DNA-binding domain 359 405 IPR011598 GO:0046983
Arst9g01474 628 SMART finulus 361 410 IPR011598 GO:0046983
Arst9g01474 628 FunFam Basic helix-loop-helix transcription factor 350 413 - -
Arst9g01474 628 MobiDBLite consensus disorder prediction 594 619 - -
Arst9g01474 628 MobiDBLite consensus disorder prediction 310 340 - -
Arst9g01474 628 Gene3D - 350 413 IPR036638 GO:0046983
Arst9g01474 628 CDD bHLH_AtPIF_like 355 417 IPR047265 -
Arst9g01474 628 MobiDBLite consensus disorder prediction 63 94 - -
Arst9g01474 628 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 352 416 IPR036638 GO:0046983
Arst9g01474 628 PANTHER TRANSCRIPTION FACTOR PIF3 1 571 IPR044273 GO:0003700|GO:0006355
Arst9g01474 628 MobiDBLite consensus disorder prediction 119 138 - -
Arst9g01474 628 MobiDBLite consensus disorder prediction 296 363 - -
Arst9g01474 628 MobiDBLite consensus disorder prediction 594 628 - -
Arst9g01474 628 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 355 404 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01474 Arst-Chr9 21185243 21189859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01474 1 501 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 36.100 1.19e-61 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g01474 HLH 6.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01474 K12126 - gmx:100794974 734.561