Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01473 ATGCCTCTGTATGAGTTATACCGGCTTTCTAGAGAGAAGCTTGATGAAGAGATTAATGGCACACGTGCAACTGATCAGTCTCGATCTTCCTCCAGGCCTGAGAAGGATTTTTTCGAGCTAATTTGGGAAAACGGCAACATTTTGACAACGCAGGGTCAGTCTAGTAGAGCTAAGAAGAGTCCACCTCGCCGGAGCTTACCATCTCACTGCTTGCCATCTCACAGTCCCAAGGGTAGAGACAGAGATGCAGGGTATGTTAACAATCCAAGGGTAGGGAAGTCTGGTGATTTAGACACCGGATTGAATGAAATTTCGATGTCAGTGCCGTCGACTGAAGTGGATTTGGGTCATGATGATGATGTCATACCTTGGTTGGATTATACAATGGATGGCTCTTTGCAGAATGAGTATGGTTCTAATTTCTTACATGAACTATCCGGGGTCACGGATCAAGACTTGCCCTCAAATCATTTTTCGCTTGTGGATAAAAGTAGTGGTAATCAGGTATTTAGGGACTCTCATAAGAATTCTGCAGAGCAAAGCAACTTTTCCAGTGTTTCTTCGACCGGCGTAGATGAGACAACTAGACCTAAAGCTAGCACGGTTGAATCATACCTGCCATCATCATTCATTTCAGTTAGACCAAGAGTATCGGATGTTACTGCGAACAATACCAGTAATGCAATGCTTCATCCACCAGTTACTGAGATTCCTTCTTCATCGAGTGATTTTTCGAGCTTAAAGATGCAGAAGCAAGATCAAGTTATTCCTAGCAATGGTTCATCTGTTATGAATTTCTCCCATTTCGCAAGGCCTGCCGCCATCGTGAGAGCTAATCTTCAGAACATTGGATTGAAGTCTGTTTCGTCTTCAACAAGATCTGAAAATGTGGAAAGTATGAATAAAGGTGCTGTTGTACCTAGCAGTAATCTTCCAGAATCAACTCTTGCCGATTCATGTAGTGAATGTCCAAAGGTTCTAATGGGGAACAATGAGAAGGCTGTGGAACAATCCAGGGATGATTTGAAACTGTTGGAGTCAAAATCTCTCGAACAGAACATTGCCGGTTCTAAACAATTAGACCCTACTTGCAAAGAGAAAGCCATTAAAATTGATCAAACTTCCAACCGAGTTCTTGGTGAAACTGCCACTAACACACAGATAGCTGCTGAAAGAAGTACGGAGCTGGTGGTAGCCTCTTCCTCTGTTGGCTCTGGCAACTGTGCAGACAGAGGTTCAGACGATCCAATTCAAAATTTGAAGCGGAAAAATCGAGACACTGAGGACTCTGAATGGCATAGTGATGATGTTGAGGAAGAATCAGTGGGTGTTAAAAAAGCAGCTGCTGGGCGTGGAGCTTCGGGTTCCAAGAGAAGTCGTGCTGCTGAAGTGCATAATCTTTCTGAAAGGAGGCGAAGAGATAGGATCAACGAGAAGATGCGTGCATTACAAGAACTCATACCCAATTGCAATAAGGTGGATAAAGCTTCAATGCTGGATGAGGCTATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATGATGTCAATGGGAGCCGGTTTGTATATGCATCCGATGATGTTGCCACATGGAATGCAGCACATGCATGCACCACACTTGGCTCCTTTTTCGCCTATGGCCTATGGAATGCAAATGGGATTGGGTATGGGATATGGCATGGCTATGCCTGATATGAATGGTGTATCATCTCGATTCCCAATGGTTCAGGTTCCCCAAATGCAAGGAACTCATGTCCCTGTTGCACAAATGTCTGGACCTACTGCAATGGTTAGATCAAATACTCAAGGGTTCGGGGTTCCAGGTCAGGGATTTCCCTTGCCACTCCCTCGTGCACCCTTATTTCCTTTCTCGGGAGGGCCGGTTATGAACTCATCGTCGGCTTTGGGATTACGTCCTTGTGGAACAACAGGGCTTAGTCAAACTGCGGATCTGGCGTCAACATCTGGCTTAAAGGACCCTTCGCCAAATACGGATTCACTAGTAAAGCAAAGTACTGGTGGTGGCGGCTGCGACTCAACTAGTCAGATGCCTATCCAGTGTGAAGCAGCAGCAACAACTGTTGGATTTGAACAGTCATCAATGGTACATAATAGCAGCCATACCTCTGAGGCTAATGACAGTGGAACTCTTAATCCTGACAAAGAAGATAATAACCTTGTGACTGGTTATGATGATTGA 2202 0.4464 MPLYELYRLSREKLDEEINGTRATDQSRSSSRPEKDFFELIWENGNILTTQGQSSRAKKSPPRRSLPSHCLPSHSPKGRDRDAGYVNNPRVGKSGDLDTGLNEISMSVPSTEVDLGHDDDVIPWLDYTMDGSLQNEYGSNFLHELSGVTDQDLPSNHFSLVDKSSGNQVFRDSHKNSAEQSNFSSVSSTGVDETTRPKASTVESYLPSSFISVRPRVSDVTANNTSNAMLHPPVTEIPSSSSDFSSLKMQKQDQVIPSNGSSVMNFSHFARPAAIVRANLQNIGLKSVSSSTRSENVESMNKGAVVPSSNLPESTLADSCSECPKVLMGNNEKAVEQSRDDLKLLESKSLEQNIAGSKQLDPTCKEKAIKIDQTSNRVLGETATNTQIAAERSTELVVASSSVGSGNCADRGSDDPIQNLKRKNRDTEDSEWHSDDVEEESVGVKKAAAGRGASGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMHPMMLPHGMQHMHAPHLAPFSPMAYGMQMGLGMGYGMAMPDMNGVSSRFPMVQVPQMQGTHVPVAQMSGPTAMVRSNTQGFGVPGQGFPLPLPRAPLFPFSGGPVMNSSSALGLRPCGTTGLSQTADLASTSGLKDPSPNTDSLVKQSTGGGGCDSTSQMPIQCEAAATTVGFEQSSMVHNSSHTSEANDSGTLNPDKEDNNLVTGYDD 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01473 733 MobiDBLite consensus disorder prediction 699 724 - -
Arst9g01473 733 MobiDBLite consensus disorder prediction 401 468 - -
Arst9g01473 733 MobiDBLite consensus disorder prediction 48 86 - -
Arst9g01473 733 FunFam Basic helix-loop-helix transcription factor 455 518 - -
Arst9g01473 733 MobiDBLite consensus disorder prediction 699 733 - -
Arst9g01473 733 Pfam Helix-loop-helix DNA-binding domain 464 510 IPR011598 GO:0046983
Arst9g01473 733 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 460 509 IPR011598 GO:0046983
Arst9g01473 733 SMART finulus 466 515 IPR011598 GO:0046983
Arst9g01473 733 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 457 521 IPR036638 GO:0046983
Arst9g01473 733 MobiDBLite consensus disorder prediction 415 445 - -
Arst9g01473 733 MobiDBLite consensus disorder prediction 224 243 - -
Arst9g01473 733 Gene3D - 455 518 IPR036638 GO:0046983
Arst9g01473 733 PANTHER TRANSCRIPTION FACTOR PIF3 1 676 IPR044273 GO:0003700|GO:0006355
Arst9g01473 733 CDD bHLH_AtPIF_like 460 522 IPR047265 -
Arst9g01473 733 MobiDBLite consensus disorder prediction 169 199 - -
Arst9g01473 733 MobiDBLite consensus disorder prediction 16 35 - -
Arst9g01473 733 MobiDBLite consensus disorder prediction 647 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01473 Arst-Chr9 21185243 21190945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01473 1 606 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 34.992 5.22e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g01473 HLH 8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01473 K12126 - gmx:100794974 860.136