Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01472 ATGCCTCTGTATGAGTTATACCGGCTTTCTAGAGAGAAGCTTGATGAAGAGATTAATGGCACACGTGCAACTGATCAGTCTCGATCTTCCTCGCCTGAGAAGGATTTTTTCGAGCTAATTTGGGAAAACGGCAACATTTTGACAACGCAGGGTCAGTCTAGTAGAGCTAAGAAGAGTCCACCTCGCCGGAGCTTACCATCTCACTGCTTGCCATCTCACAGTCCCAAGGGTAGAGACAGAGATGCAGGGTATGTTAACAATCCAAGGGTAGGGAAGTCTGGTGATTTAGACACCGGATTGAATGAAATTTCGATGTCAGTGCCGTCGACTGAAGTGGATTTGGGTCATGATGATGATGTCATACCTTGGTTGGATTATACAATGGATGGCTCTTTGCAGAATGAGTATGGTTCTAATTTCTTACATGAACTATCCGGGGTCACGGATCAAGACTTGCCCTCAAATCATTTTTCGCTTGTGGATAAAAGTAGTGGTAATCAGGTATTTAGGGACTCTCATAAGAATTCTGCAGAGCAAAGCAACTTTTCCAGTGTTTCTTCGACCGGCGTAGATGAGACAACTAGACCTAAAGCTAGCACGGTTGAATCATACCTGCCATCATCATTCATTTCAGTTAGACCAAGAGTATCGGATGTTACTGCGAACAATACCAGTAATGCAATGCTTCATCCACCAGTTACTGAGATTCCTTCTTCATCGAGTGATTTTTCGAGCTTAAAGATGCAGAAGCAAGATCAAGTTATTCCTAGCAATGGTTCATCTGTTATGAATTTCTCCCATTTCGCAAGGCCTGCCGCCATCGTGAGAGCTAATCTTCAGAACATTGGATTGAAGTCTGTTTCGTCTTCAACAAGATCTGAAAATGTGGAAAGTATGAATAAAGGTGCTGTTGTACCTAGCAGTAATCTTCCAGAATCAACTCTTGCCGATTCATGTAGTGAATGTCCAAAGGTTCTAATGGGGAACAATGAGAAGGCTGTGGAACAATCCAGGGATGATTTGAAACTGTTGGAGTCAAAATCTCTCGAACAGAACATTGCCGGTTCTAAACAATTAGACCCTACTTGCAAAGAGAAAGCCATTAAAATTGATCAAACTTCCAACCGAGTTCTTGGTGAAACTGCCACTAACACACAGATAGCTGCTGAAAGAAGTACGGAGCTGGTGGTAGCCTCTTCCTCTGTTGGCTCTGGCAACTGTGCAGACAGAGGTTCAGACGATCCAATTCAAAATTTGAAGCGGAAAAATCGAGACACTGAGGACTCTGAATGGCATAGTGATGATGTTGAGGAAGAATCAGTGGGTGTTAAAAAAGCAGCTGCTGGGCGTGGAGCTTCGGGTTCCAAGAGAAGTCGTGCTGCTGAAGTGCATAATCTTTCTGAAAGGAGGCGAAGAGATAGGATCAACGAGAAGATGCGTGCATTACAAGAACTCATACCCAATTGCAATAAGGTGGATAAAGCTTCAATGCTGGATGAGGCTATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATGATGTCAATGGGAGCCGGTTTGTATATGCATCCGATGATGTTGCCACATGGAATGCAGCACATGCATGCACCACACTTGGCTCCTTTTTCGCCTATGGCCTATGGAATGCAAATGGGATTGGGTATGGGATATGGCATGGCTATGCCTGATATGAATGGTGTATCATCTCGATTCCCAATGGTTCAGGTTCCCCAAATGCAAGGAACTCATGTCCCTGTTGCACAAATGTCTGGACCTACTGCAATGGTTAGATCAAATACTCAAGGGTTCGGGGTTCCAGGTCAGGGATTTCCCTTGCCACTCCCTCGTGCACCCTTATTTCCTTTCTCGGGAGGGCCGGTTATGAACTCATCGTCGGCTTTGGGATTACGTCCTTGTGGAACAACAGGGCTTAGTCAAACTGCGGATCTGGCGTCAACATCTGGCTTAAAGGACCCTTCGCCAAATACGGATTCACTAGTAAAGCAAAGTACTGGTGGTGGCGGCTGCGACTCAACTAGTCAGATGCCTATCCAGTGTGAAGCAGCAGCAACAACTGTTGGATTTGAACAGTCATCAATGGTACATAATAGCAGCCATACCTCTGAGGCTAATGACAGTGGAACTCTTAATCCTGACAAAGAAGATAATAACCTTGTGACTGGTTATGATGATTGA 2199 0.4461 MPLYELYRLSREKLDEEINGTRATDQSRSSSPEKDFFELIWENGNILTTQGQSSRAKKSPPRRSLPSHCLPSHSPKGRDRDAGYVNNPRVGKSGDLDTGLNEISMSVPSTEVDLGHDDDVIPWLDYTMDGSLQNEYGSNFLHELSGVTDQDLPSNHFSLVDKSSGNQVFRDSHKNSAEQSNFSSVSSTGVDETTRPKASTVESYLPSSFISVRPRVSDVTANNTSNAMLHPPVTEIPSSSSDFSSLKMQKQDQVIPSNGSSVMNFSHFARPAAIVRANLQNIGLKSVSSSTRSENVESMNKGAVVPSSNLPESTLADSCSECPKVLMGNNEKAVEQSRDDLKLLESKSLEQNIAGSKQLDPTCKEKAIKIDQTSNRVLGETATNTQIAAERSTELVVASSSVGSGNCADRGSDDPIQNLKRKNRDTEDSEWHSDDVEEESVGVKKAAAGRGASGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMHPMMLPHGMQHMHAPHLAPFSPMAYGMQMGLGMGYGMAMPDMNGVSSRFPMVQVPQMQGTHVPVAQMSGPTAMVRSNTQGFGVPGQGFPLPLPRAPLFPFSGGPVMNSSSALGLRPCGTTGLSQTADLASTSGLKDPSPNTDSLVKQSTGGGGCDSTSQMPIQCEAAATTVGFEQSSMVHNSSHTSEANDSGTLNPDKEDNNLVTGYDD 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01472 732 CDD bHLH_AtPIF_like 459 521 IPR047265 -
Arst9g01472 732 MobiDBLite consensus disorder prediction 168 198 - -
Arst9g01472 732 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 456 520 IPR036638 GO:0046983
Arst9g01472 732 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Arst9g01472 732 MobiDBLite consensus disorder prediction 698 732 - -
Arst9g01472 732 MobiDBLite consensus disorder prediction 646 681 - -
Arst9g01472 732 FunFam Basic helix-loop-helix transcription factor 454 517 - -
Arst9g01472 732 MobiDBLite consensus disorder prediction 48 85 - -
Arst9g01472 732 MobiDBLite consensus disorder prediction 414 444 - -
Arst9g01472 732 Pfam Helix-loop-helix DNA-binding domain 463 509 IPR011598 GO:0046983
Arst9g01472 732 Gene3D - 454 517 IPR036638 GO:0046983
Arst9g01472 732 SMART finulus 465 514 IPR011598 GO:0046983
Arst9g01472 732 PANTHER TRANSCRIPTION FACTOR PIF3 1 675 IPR044273 GO:0003700|GO:0006355
Arst9g01472 732 MobiDBLite consensus disorder prediction 698 723 - -
Arst9g01472 732 MobiDBLite consensus disorder prediction 400 467 - -
Arst9g01472 732 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01472 Arst-Chr9 21185243 21190945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01472 1 605 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 35.152 2.96e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g01472 HLH 8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01472 K12126 - gmx:100794974 862.448