Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01450 ATGGGTATCAAGGGTTTAACGAAGCTTTTGGCGGACAATGCACCGAAAGCCATGAAGGAGAATAAATTCGAGAGCTACTTTGGACGCAAGATCGCCATTGACGCCAGCATGAGCATTTACCAGTTCCTTATTGTTGTGGGAAGAATTGGAACTGAAATGCTCACTAATGAAGCTGGTGAAGTTACTAGTCATTTGCAAGGCATGTTTACAAGGACTATCAGGCTTCTCGAAGCTGGGATGAAACCAGTATATGTTTTTGATGGGAAACCACCAGAGTTGAAGAAGCAAGAGCTGGCAAAACGTTTGACGAGGAGGGCTGATGCTACCGAGGATTTGTCTGAAGCCAAGGAGACAGCCAATAAGGAAGACATTGAAAAATTCAGCAAACGGACTGTGAAGGTGACAAAGCAGCATAATGAAGACTGCAAAAAGCTTTTAAGACTCATGGGAGTGCCCGTTGTTGAGGCACCTTCAGAAGCAGAGGCTCAGTGTGCTTCTCTTTGTAAAGCTGGAAAGGTTTATGCTGTAGCTTCAGAAGATATGGATTCTTTAACATTTGGAGCTCCCAAATTTCTTCGCCATTTAATGGATCCCAGCTCCAAAAAGATTCCAGTGATGGAATTTGACATTAGCAAGGTTTTGGAGGACCTACAATTGAGCATGGACCAATTTATTGACCTATGCATTCTTTCTGGGTGTGATTATTGTGAAAGCATCCGAGGTATTGGAGGAACAACAGCTTTGAAGCTAATACGTCAACATGGTTCTATTGAGATGATACTGGAGAATATAAACAAAGAAAGCAGGTACCACATTCCAGATGATTGGCCATATCAGGAGGCCCGACGGCTTTTTAAAGAACCATTGGTCATAACTGAAGACGAGCAACTTAATTTGAAGTGGTCTGCTCCAGATGAAGAAGGGTTAGTAACATTTCTGGTAAATGAGAATGGATTCAACATTGATAGGGTGACAAAGGCAATTGAAAAAATTAAAGCAGCAAAGAACAAGTCGTCACAAGGCCGATTGGAATCATTTTTTAAGCCTACAGCAAATCCATCTGTACCCATTAAACGGAAGGAAACACCACAAGCTAATGCTAAAGAGAGTAACAAAAAGACTAAAGCCACTGTTGCTAAGAAGAAGAAATAG 1152 0.4175 MGIKGLTKLLADNAPKAMKENKFESYFGRKIAIDASMSIYQFLIVVGRIGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPVYVFDGKPPELKKQELAKRLTRRADATEDLSEAKETANKEDIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVVEAPSEAEAQCASLCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFDISKVLEDLQLSMDQFIDLCILSGCDYCESIRGIGGTTALKLIRQHGSIEMILENINKESRYHIPDDWPYQEARRLFKEPLVITEDEQLNLKWSAPDEEGLVTFLVNENGFNIDRVTKAIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKETPQANAKESNKKTKATVAKKKK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01450 383 Coils Coil 105 125 - -
Arst9g01450 383 CDD H3TH_FEN1-Euk 222 291 - -
Arst9g01450 383 SMART HhH_4 221 254 IPR008918 GO:0003677|GO:0003824
Arst9g01450 383 SUPERFAMILY PIN domain-like 2 234 IPR029060 -
Arst9g01450 383 SMART xpgn3 1 108 IPR006085 GO:0004518
Arst9g01450 383 Pfam XPG N-terminal domain 1 107 IPR006085 GO:0004518
Arst9g01450 383 MobiDBLite consensus disorder prediction 338 383 - -
Arst9g01450 383 Hamap Flap endonuclease 1 [fen]. 1 348 IPR023426 GO:0016788
Arst9g01450 383 FunFam Flap endonuclease 1 219 287 - -
Arst9g01450 383 ProSitePatterns XPG protein signature 2. 150 164 IPR019974 GO:0016788
Arst9g01450 383 SMART xpgineu 147 219 IPR006086 GO:0004518
Arst9g01450 383 FunFam Flap endonuclease 1 10 222 - -
Arst9g01450 383 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 219 355 IPR036279 -
Arst9g01450 383 Pfam XPG I-region 150 234 IPR006086 GO:0004518
Arst9g01450 383 Gene3D - 2 218 - -
Arst9g01450 383 Gene3D - 219 287 - -
Arst9g01450 383 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 28 42 IPR006084 -
Arst9g01450 383 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 82 101 IPR006084 -
Arst9g01450 383 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 167 187 IPR006084 -
Arst9g01450 383 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 224 239 IPR006084 -
Arst9g01450 383 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 146 163 IPR006084 -
Arst9g01450 383 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 375 IPR006084 -
Arst9g01450 383 CDD PIN_FEN1 4 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01450 Arst-Chr9 20793397 20799453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01450 1 362 Core DNA Replication Machinery Family AT5G26680 84.807 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01450 K04799 - gmx:100792878 654.44