Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g01449 | ATGGGTATCAAGGGTTTAACGAAGCTTTTGGCGGACAATGCACCGAAAGCCATGAAGGAGAATAAATTCGAGAGCTACTTTGGACGCAAGATCGCCATTGACGCCAGCATGAGCATTTACCAGTTCCTTATTGTTGTGGGAAGAATTGGAACTGAAATGCTCACTAATGAAGCTGGTGAAGTTACTAGTCATTTGCAAGGCATGTTTACAAGGACTATCAGGCTTCTCGAAGCTGGGATGAAACCAGTATATGTTTTTGATGGGAAACCACCAGAGTTGAAGAAGCAAGAGCTGGCAAAACGTTTGACGAGGAGGGCTGATGCTACCGAGGATTTGTCTGAAGCCAAGGAGACAGCCAATAAGGAAGACATTGAAAAATTCAGCAAACGGACTGTGAAGGTGACAAAGCAGCATAATGAAGACTGCAAAAAGCTTTTAAGACTCATGGGAGTGCCCGTTGTTGAGGCACCTTCAGAAGCAGAGGCTCAGTGTGCTTCTCTTTGTAAAGCTGGAAAGGTTTATGCTGTAGCTTCAGAAGATATGGATTCTTTAACATTTGGAGCTCCCAAATTTCTTCGCCATTTAATGGATCCCAGCTCCAAAAAGATTCCAGTGATGGAATTTGACATTAGCAAGGTTTTGGAGGACCTACAATTGAGCATGGACCAATTTATTGACCTATGCATTCTTTCTGGGTGTGATTATTGTGAAAGCATCCGAGGTATTGGAGGAACAACAGCTTTGAAGCTAATACGTCAACATGGTTCTATTGAGATGATACTGGAGAATATAAACAAAGAAAGGTACCACATTCCAGATGATTGGCCATATCAGGAGGCCCGACGGCTTTTTAAAGAACCATTGGTCATAACTGAAGACGAGCAACTTAATTTGAAGTGGTCTGCTCCAGATGAAGAAGGGTTAGTAACATTTCTGGTAAATGAGAATGGATTCAACATTGATAGGGTGACAAAGGCAATTGAAAAAATTAAAGCAGCAAAGAACAAGTCGTCACAAGGCCGATTGGAATCATTTTTTAAGCCTACAGCAAATCCATCTGTACCCATTAAACGGAAGGAAAGCAAATGCATGCTTAAATCTTTCAAACCAGATATTGAGCATAAGATGTTCTCTCTGCAAACTTTTAACTGTTCAAGGCCCATGGTTAGTGGCAAGTTAAGCTTGCCAAAACATAATCTGGGTTCCAAGCACCACGTGTCATTGTCATTATTTAGAGGTGTCTGCTTTGGTGCCTGA | 1257 | 0.4185 | MGIKGLTKLLADNAPKAMKENKFESYFGRKIAIDASMSIYQFLIVVGRIGTEMLTNEAGEVTSHLQGMFTRTIRLLEAGMKPVYVFDGKPPELKKQELAKRLTRRADATEDLSEAKETANKEDIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVVEAPSEAEAQCASLCKAGKVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFDISKVLEDLQLSMDQFIDLCILSGCDYCESIRGIGGTTALKLIRQHGSIEMILENINKERYHIPDDWPYQEARRLFKEPLVITEDEQLNLKWSAPDEEGLVTFLVNENGFNIDRVTKAIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKESKCMLKSFKPDIEHKMFSLQTFNCSRPMVSGKLSLPKHNLGSKHHVSLSLFRGVCFGA | 418 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g01449 | 418 | Coils | Coil | 105 | 125 | - | - | |
Arst9g01449 | 418 | Hamap | Flap endonuclease 1 [fen]. | 1 | 347 | IPR023426 | GO:0016788 | |
Arst9g01449 | 418 | Gene3D | - | 219 | 286 | - | - | |
Arst9g01449 | 418 | SMART | HhH_4 | 221 | 254 | IPR008918 | GO:0003677|GO:0003824 | |
Arst9g01449 | 418 | SMART | xpgn3 | 1 | 108 | IPR006085 | GO:0004518 | |
Arst9g01449 | 418 | CDD | PIN_FEN1 | 4 | 332 | - | - | |
Arst9g01449 | 418 | Pfam | XPG N-terminal domain | 1 | 107 | IPR006085 | GO:0004518 | |
Arst9g01449 | 418 | PANTHER | FLAP ENDONUCLEASE FAMILY MEMBER | 1 | 368 | IPR006084 | - | |
Arst9g01449 | 418 | ProSitePatterns | XPG protein signature 2. | 150 | 164 | IPR019974 | GO:0016788 | |
Arst9g01449 | 418 | SMART | xpgineu | 147 | 219 | IPR006086 | GO:0004518 | |
Arst9g01449 | 418 | CDD | H3TH_FEN1-Euk | 222 | 290 | - | - | |
Arst9g01449 | 418 | Pfam | XPG I-region | 150 | 234 | IPR006086 | GO:0004518 | |
Arst9g01449 | 418 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 167 | 187 | IPR006084 | - | |
Arst9g01449 | 418 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 224 | 239 | IPR006084 | - | |
Arst9g01449 | 418 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 28 | 42 | IPR006084 | - | |
Arst9g01449 | 418 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 82 | 101 | IPR006084 | - | |
Arst9g01449 | 418 | PRINTS | Xeroderma pigmentosum group G/yeast RAD superfamily signature | 146 | 163 | IPR006084 | - | |
Arst9g01449 | 418 | SUPERFAMILY | 5' to 3' exonuclease, C-terminal subdomain | 219 | 354 | IPR036279 | - | |
Arst9g01449 | 418 | Gene3D | - | 2 | 218 | - | - | |
Arst9g01449 | 418 | FunFam | Flap endonuclease 1 | 10 | 222 | - | - | |
Arst9g01449 | 418 | SUPERFAMILY | PIN domain-like | 2 | 234 | IPR029060 | - | |
Arst9g01449 | 418 | FunFam | Flap endonuclease 1 | 219 | 286 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g01449 | Arst-Chr9 | 20793397 | 20799453 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst9g01449 | 1 | 382 | Core DNA Replication Machinery Family | AT5G26680 | 82.723 | 0.0 | 676 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g01449 | K04799 | - | cave:132187694 | 691.034 |