Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01424 ATGGCATCTTCATTCTCAACTCAATTGCTGCAAAGTCAAATTCTACTTCCTCGGTTTCATCATCTCCAGGGGAAACTTAGCCAAGATGTGTCGATGGTTCGGAAGCCGCAGGTTGTCTGTAGCAGTATCGGATCACGGATTGGTTACAACCAAACACTGGCTTCAAGATCACACTATGCTGTGAGGCTTTCTGTCACACAACAATCTGAAGCAAAATCAATGAGATATAGGAGAATGACATGCATGAATGCCACTGAAAGTGAGCTGCTAGCCAAAGTGACAACTAAGTGCTTCTTTGATGTACAAGTTGCGGGTGAACCTGCTGGCAGGATTGTTTTTGGTTTATTTGGGGACGTCGTTCCTAAAACAGCCGAGAATTTTCGAGCTTTGTGCACAGGAGAGAAAGGATATGGCTATAAAGGATGCTACTTCCATCGTATAATCAAAGACTTCATGATTCAAGGCGGGGACTTCACCGAGGGAAATGGAACCGGTGGAGTTAGTATCTATGGTTCTCGGTTTGAAGATGAGAATTTTAACTTGAAGCATGCTGGTCCTGGAATTTTGAGTATGGCAAATGCTGGTCCTGATACCAATGGCAGTCAGTTTTTTATTTGCACCGTACCGACGCCATGGCTAGACAATCGCCATGTCGTGTTCGGACAAGTCATTGATGGAATGGATGTTGTGAAGACTCTCGAGTCACTAGAGACGAGCCCGCGTGATAACAGCCCCAAGAAAGCATGCAAAATCGCTAATTGCGGTGAACTGCCTCTTGATGGTTGA 786 0.4517 MASSFSTQLLQSQILLPRFHHLQGKLSQDVSMVRKPQVVCSSIGSRIGYNQTLASRSHYAVRLSVTQQSEAKSMRYRRMTCMNATESELLAKVTTKCFFDVQVAGEPAGRIVFGLFGDVVPKTAENFRALCTGEKGYGYKGCYFHRIIKDFMIQGGDFTEGNGTGGVSIYGSRFEDENFNLKHAGPGILSMANAGPDTNGSQFFICTVPTPWLDNRHVVFGQVIDGMDVVKTLESLETSPRDNSPKKACKIANCGELPLDG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01424 261 CDD cyclophilin_ABH_like 96 255 - -
Arst9g01424 261 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 139 156 IPR020892 GO:0003755|GO:0006457
Arst9g01424 261 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 96 257 - -
Arst9g01424 261 FunFam Peptidyl-prolyl cis-trans isomerase 83 261 - -
Arst9g01424 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 215 230 IPR002130 GO:0000413|GO:0003755
Arst9g01424 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 156 IPR002130 GO:0000413|GO:0003755
Arst9g01424 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 202 214 IPR002130 GO:0000413|GO:0003755
Arst9g01424 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 202 IPR002130 GO:0000413|GO:0003755
Arst9g01424 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 130 IPR002130 GO:0000413|GO:0003755
Arst9g01424 261 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 98 256 IPR002130 GO:0000413|GO:0003755
Arst9g01424 261 Gene3D - 84 260 IPR029000 -
Arst9g01424 261 SUPERFAMILY Cyclophilin-like 89 257 IPR029000 -
Arst9g01424 261 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 100 255 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01424 Arst-Chr9 20267303 20271121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01424 75 251 U-box Gene Family AT5G67530 40.838 4.73e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01424 K03768 - gmx:100526955 393.66