Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g01394 ATGGGTAAAAGAGGGTCTTCCTGTTCCTCTTCCTCTTCATCTTTCTCAACTGCTTCTTCACATCTTCATGATGATCTTAGTCTTGGACTCAGCATTTCTTCCACTCATCATCAACATCTTCCTTCCTCTATCTCAAGGGGACAGTGGCAAATCCAATCATCATCACTTGCAAGTAGTTCACAAGGTGCTGAATTGACAAATGATTGCAGTGATCATAACACGTTCTTTGTCAAAGTGTACATGGAAGGCATTCCAATTGGCAGAAAACTCAACCTTTTAGTTCATGATGGCTACCATGAATTGGTTAAAGCTCTTGAACAAATGTTTGACACTACCATACTCTGGGGAACTGAGTTAGATGCAGTGCAAGCAGAGAGGTGCCATGTGCTAACTTATGAAGATGGAGAAGGGGACTTGATTATGGTTGGAGATGTGCCTTGGGAGATGTTCTTATCAGCTGTAAAGAGGTTGAAGATCACCAGGGTTGACACATTTGGATGTTGA 504 0.4206 MGKRGSSCSSSSSSFSTASSHLHDDLSLGLSISSTHHQHLPSSISRGQWQIQSSSLASSSQGAELTNDCSDHNTFFVKVYMEGIPIGRKLNLLVHDGYHELVKALEQMFDTTILWGTELDAVQAERCHVLTYEDGEGDLIMVGDVPWEMFLSAVKRLKITRVDTFGC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g01394 167 Pfam AUX/IAA family 60 161 IPR033389 -
Arst9g01394 167 SUPERFAMILY CAD & PB1 domains 70 159 - -
Arst9g01394 167 ProSiteProfiles PB1 domain profile. 74 164 IPR000270 GO:0005515
Arst9g01394 167 Gene3D - 68 166 - -
Arst9g01394 167 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 63 162 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g01394 Arst-Chr9 19692407 19694173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g01394 78 159 B3 DNA Binding Superfamily AT4G23980 35.366 9.27e-13 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst9g01394 AUX_IAA 8.3e-29 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g01394 K14484 - gmx:100784866 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g01394 9 19692407 19694173 Arst9g01394 9 19692407 19694173 ECH
Arst6g00725 6 6513842 6514609 Arst9g01394 9 19692407 19694173 PCT